RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 CCDC194A0A1B0GVG4 234 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 CYSRT1A8MQ03 144 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 N4BP3O15049 544 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 SLITRK3O94933 977 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 APBB3O95704 486 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 EGFP01133 1207 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 PRKCBP05771 671 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 DRD1P21728 446 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 DGKEP52429 567 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 NLRP5P59047 1200 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 AKAP17AQ02040 695 aaKnown RBP7.5□□□□□ -1.21
ATXN3-224ENST00000554040 SEMA3BQ13214 749 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 CTTNQ14247 550 aaKnown RBP7.5□□□□□ -1.21
ATXN3-224ENST00000554040 CTXN3Q4LDR2 81 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 USP39Q53GS9 565 aaKnown RBP7.5□□□□□ -1.21
ATXN3-224ENST00000554040 STXBP5Q5T5C0 1151 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 SYT13Q7L8C5 426 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 TMC8Q8IU68 726 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 NOSTRINQ8IVI9 506 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 C3orf58Q8NDZ4 430 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 BPIFB1Q8TDL5 484 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 DYDC2Q96IM9 177 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 LRIG1Q96JA1 1093 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 ARID3AQ99856 593 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 PDZD7Q9H5P4 517 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 CCDC86Q9H6F5 360 aaKnown RBP7.5□□□□□ -1.21
ATXN3-224ENST00000554040 KCNMB3Q9NPA1 279 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 SH3GLB2Q9NR46 395 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 C1GALT1Q9NS00 363 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 THG1LQ9NWX6 298 aaKnown RBP7.5□□□□□ -1.21
ATXN3-224ENST00000554040 GDAQ9Y2T3 454 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 VWA8A3KMH1 1905 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 TICRRQ7Z2Z1 1910 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 KNTC1P50748 2209 aa7.5□□□□□ -1.21
ATXN3-224ENST00000554040 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-224ENST00000554040 SMIM28A0A1B0GU29 152 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 CYP26A1O43174 497 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 SLC37A4O43826 429 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 RAB6AP20340 208 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 GALK1P51570 392 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 EPHB3P54753 998 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 FAM193AP78312 1265 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 AMPD2Q01433 879 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 DMC1Q14565 340 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 FBXO43Q4G163 708 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 TRIM61Q5EBN2 209 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 GLRA4Q5JXX5 417 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 CDCA2Q69YH5 1023 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-224ENST00000554040 CCNI2Q6ZMN8 369 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-224ENST00000554040 GAREM2Q75VX8 874 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 DYMQ7RTS9 669 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 TPH2Q8IWU9 490 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 PIGKQ92643 395 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 CHFRQ96EP1 664 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 ADPGKQ9BRR6 497 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 NUSAP1Q9BXS6 441 aaKnown RBP7.49□□□□□ -1.21
ATXN3-224ENST00000554040 POLR3FQ9H1D9 316 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-224ENST00000554040 DNAJC25Q9H1X3 360 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 ATXN3LQ9H3M9 355 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 FBRSL1Q9HCM7 1045 aaKnown RBP7.49□□□□□ -1.21
ATXN3-224ENST00000554040 GKN1Q9NS71 199 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 ANKEF1Q9NU02 776 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 NAP1L2Q9ULW6 460 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-224ENST00000554040 PCDHA4Q9UN74 947 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 INVSQ9Y283 1065 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 YIPF1Q9Y548 306 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 ZNF462Q96JM2 2506 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 KALRNO60229 2985 aa7.49□□□□□ -1.21
ATXN3-224ENST00000554040 OTOL1A6NHN0 477 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-224ENST00000554040 LRRIQ4A6NIV6 560 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 ACKR2O00590 384 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 PODXLO00592 558 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 CPNE3O75131 537 aaKnown RBP7.48□□□□□ -1.21
ATXN3-224ENST00000554040 LYPLA2O95372 231 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 PRAMEF12O95522 483 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 ENGP17813 658 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 MAPK8P45983 427 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 DHPSP49366 369 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-224ENST00000554040 MCM2P49736 904 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 CYP4A11Q02928 519 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 PLD1Q13393 1074 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 PRPF4BQ13523 1007 aaKnown RBP7.48□□□□□ -1.21
ATXN3-224ENST00000554040 RUNX3Q13761 415 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 HNRNPDQ14103 355 aaKnown RBP7.48□□□□□ -1.21
ATXN3-224ENST00000554040 NTRK3Q16288 839 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 ARHGAP15Q53QZ3 475 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 XKR4Q5GH76 650 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 GPR158Q5T848 1215 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 NCAPH2Q6IBW4 605 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 PPP4R3AQ6IN85 833 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 ZNF280DQ6N043 979 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 ALKAL1Q6UXT8 129 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 ZNF765Q7L2R6 523 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 DNAJB7Q7Z6W7 309 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-224ENST00000554040 WFDC3Q8IUB2 231 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 ZBTB8OSQ8IWT0 167 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 HDDC3Q8N4P3 179 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 APPL2Q8NEU8 664 aa7.48□□□□□ -1.21
ATXN3-224ENST00000554040 BEST2Q8NFU1 509 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms