RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 PPME1Q9Y570 386 aa15.2■□□□□ 0.02
ACTN1-211ENST00000553882 PPP2R3BQ9Y5P8 575 aa15.2■□□□□ 0.02
ACTN1-211ENST00000553882 A0A1B0GUA9 196 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 KCNN4O15554 427 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 HBP1O60381 514 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 LPXNO60711 386 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 C22orf31O95567 290 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 MT-ND3P03897 115 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 ATP2A2P16615 1042 aaKnown RBP15.19■□□□□ 0.02
ACTN1-211ENST00000553882 FAAP100Q0VG06 881 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 KRT81Q14533 505 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 NOMO1Q15155 1222 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 ZC3H12AQ5D1E8 599 aaKnown RBP15.19■□□□□ 0.02
ACTN1-211ENST00000553882 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 CCDC62Q6P9F0 684 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 LRRC6Q86X45 466 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 EXOC8Q8IYI6 725 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 AGGF1Q8N302 714 aaeCLIP15.19■□□□□ 0.02
ACTN1-211ENST00000553882 ZNF276Q8N554 614 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 CCDC33Q8N5R6 958 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 FAM111AQ96PZ2 611 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 PDZD7Q9H5P4 517 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 C15orf41Q9Y2V0 281 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 LTBP3Q9NS15 1303 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 C2CD4BA6NLJ0 364 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 HMGCRP04035 888 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 INHBAP08476 426 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 NEFHP12036 1026 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 ARF4P18085 180 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-211ENST00000553882 CCND1P24385 295 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 GABRB2P47870 512 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 ILDR2Q71H61 639 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 PRPF39Q86UA1 669 aaKnown RBP15.19■□□□□ 0.02
ACTN1-211ENST00000553882 CTAGE3PQ8IX95 158 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 TTC17Q96AE7 1141 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 MMP19Q99542 508 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
ACTN1-211ENST00000553882 CNPY3Q9BT09 278 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 LRMDAQ9H2I8 198 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 MANSC1Q9H8J5 431 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 PRMT7Q9NVM4 692 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-211ENST00000553882 NOP53Q9NZM5 478 aaKnown RBP15.19■□□□□ 0.02
ACTN1-211ENST00000553882 ZFP69BQ9UJL9 534 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 CEP350Q5VT06 3117 aa15.19■□□□□ 0.02
ACTN1-211ENST00000553882 PYGBP11216 843 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 EPHB2P29323 1055 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 PHKA2P46019 1235 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 TMEM132DQ14C87 1099 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 KCNV2Q8TDN2 545 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 RAB3IPQ96QF0 476 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-211ENST00000553882 CYLDQ9NQC7 956 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 FAM49BQ9NUQ9 324 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 GEMIN8Q9NWZ8 242 aaKnown RBP15.18■□□□□ 0.02
ACTN1-211ENST00000553882 RBPJLQ9UBG7 517 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 FETUBQ9UGM5 382 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 PAPPA2Q9BXP8 1791 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 VDRP11473 427 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 PCK1P35558 622 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 ZNF200P98182 395 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-211ENST00000553882 KCNJ11Q14654 390 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 AMHR2Q16671 573 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 PPP6R3Q5H9R7 873 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-211ENST00000553882 SLC7A6OSQ96CW6 309 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-211ENST00000553882 TRIM56Q9BRZ2 755 aaKnown RBP15.18■□□□□ 0.02
ACTN1-211ENST00000553882 TBC1D10AQ9BXI6 508 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 CXCL16Q9H2A7 254 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 RNF19AQ9NV58 838 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 ERAP1Q9NZ08 941 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 TEX264Q9Y6I9 313 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 A0A0G2JMZ2 1700 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 LRRC37A2A6NM11 1700 aa15.18■□□□□ 0.02
ACTN1-211ENST00000553882 C2orf71A6NGG8 1288 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 TM9SF1O15321 606 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 APRTP07741 180 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 ZNF286BP0CG31 522 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 TROVE2P10155 538 aaKnown RBP eCLIP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 P4HA1P13674 534 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 RBL1P28749 1068 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 STIP1P31948 543 aaKnown RBP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 TLDC1Q6P9B6 456 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 SCUBE3Q8IX30 993 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 PLD5Q8N7P1 536 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 PPM1NQ8N819 430 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 PHACTR1Q9C0D0 580 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 SSU72Q9NP77 194 aaKnown RBP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 BARX2Q9UMQ3 279 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 A0A0G2JLL6 359 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 CLNS1AP54105 237 aaKnown RBP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 CA9Q16790 459 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 PMF1Q6P1K2 205 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 PRRT2Q7Z6L0 340 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-211ENST00000553882 CLNKQ7Z7G1 428 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 LONP2Q86WA8 852 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 NLGN2Q8NFZ4 835 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 RNF157Q96PX1 679 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 TSSK1BQ9BXA7 367 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 B3GNT5Q9BYG0 378 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 USP29Q9HBJ7 922 aa15.17■□□□□ 0.02
ACTN1-211ENST00000553882 KANSL3Q9P2N6 904 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms