RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 GKN1Q9NS71 199 aa21.51■■□□□ 1.03
FOXA1-203ENST00000553751 TSPAN16Q9UKR8 245 aa21.51■■□□□ 1.03
FOXA1-203ENST00000553751 SCML2Q9UQR0 700 aa21.51■■□□□ 1.03
FOXA1-203ENST00000553751 PCDHB4Q9Y5E5 795 aa21.51■■□□□ 1.03
FOXA1-203ENST00000553751 FAM170BA6NMN3 283 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 MAN2B1O00754 1011 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 CYP26A1O43174 497 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 PAEPP09466 180 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 CD19P15391 556 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 KIF11P52732 1056 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 ZNF132P52740 706 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 MAN2A1Q16706 1144 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 HSP90AA4PQ58FG1 418 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 TRIM65Q6PJ69 517 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 TTC8Q8TAM2 541 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 MSANTD3Q96H12 275 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 CCSER2Q9H7U1 834 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 SAMSN1Q9NSI8 373 aaKnown RBP21.5■■□□□ 1.03
FOXA1-203ENST00000553751 CPQQ9Y646 472 aa21.5■■□□□ 1.03
FOXA1-203ENST00000553751 GTPBP10A4D1E9 387 aaKnown RBP21.49■■□□□ 1.03
FOXA1-203ENST00000553751 RNF225M0QZC1 329 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-203ENST00000553751 LEFTY2O00292 366 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 O00370 1275 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 COCHO43405 550 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 VDRP11473 427 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 KPNA1P52294 538 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-203ENST00000553751 ITPRIPL2Q3MIP1 535 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 MIIPQ5JXC2 388 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 HECTD3Q5T447 861 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 CC2D1AQ6P1N0 951 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-203ENST00000553751 GBP6Q6ZN66 633 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 C11orf57Q6ZUT1 292 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-203ENST00000553751 PIGZQ86VD9 579 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 DTWD2Q8NBA8 298 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 RBBP8NLQ8NC74 664 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-203ENST00000553751 TTC16Q8NEE8 873 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 OSCP1Q8WVF1 389 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 TFAP2BQ92481 460 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 FAM3CQ92520 227 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 NELL2Q99435 816 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 UBXN6Q9BZV1 441 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 EBF3Q9H4W6 596 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 C8orf33Q9H7E9 229 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-203ENST00000553751 KIAA1257Q9ULG3 409 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 MRPS17Q9Y2R5 130 aaKnown RBP21.49■■□□□ 1.03
FOXA1-203ENST00000553751 NFE2L3Q9Y4A8 694 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 USP3Q9Y6I4 520 aa21.49■■□□□ 1.03
FOXA1-203ENST00000553751 OTOL1A6NHN0 477 aaPredicted RBP21.48■■□□□ 1.03
FOXA1-203ENST00000553751 SPECC1L-ADORA2AF8WAN1 911 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 MBL2P11226 248 aaPredicted RBP21.48■■□□□ 1.03
FOXA1-203ENST00000553751 ARSAP15289 507 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 SLC9A1P19634 815 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 CTHP32929 405 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 BCAT1P54687 386 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 PTPN5P54829 565 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 APBA1Q02410 837 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 FZD5Q13467 585 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 PDGFRLQ15198 375 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 EXOC3L4Q17RC7 722 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 RAB41Q5JT25 222 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 TXNDC11Q6PKC3 985 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 CCDC186Q7Z3E2 898 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 RALGPS2Q86X27 583 aaPredicted RBP21.48■■□□□ 1.03
FOXA1-203ENST00000553751 ENOX1Q8TC92 643 aaKnown RBP21.48■■□□□ 1.03
FOXA1-203ENST00000553751 ZFRQ96KR1 1074 aaKnown RBP21.48■■□□□ 1.03
FOXA1-203ENST00000553751 ZSWIM1Q9BR11 485 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 TUBGCP2Q9BSJ2 902 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 UBE2TQ9NPD8 197 aaPredicted RBP21.48■■□□□ 1.03
FOXA1-203ENST00000553751 TLR8Q9NR97 1041 aaKnown RBP21.48■■□□□ 1.03
FOXA1-203ENST00000553751 OSER1Q9NX31 292 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 SMPD4Q9NXE4 827 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 TMEM63CQ9P1W3 806 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 NDRG2Q9UN36 371 aaKnown RBP21.48■■□□□ 1.03
FOXA1-203ENST00000553751 CNTN6Q9UQ52 1028 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 WNT6Q9Y6F9 365 aa21.48■■□□□ 1.03
FOXA1-203ENST00000553751 KCNJ18B7U540 433 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 TULP2O00295 520 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 CALCAP01258 141 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 PDE4CQ08493 712 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 BST2Q10589 180 aaKnown RBP21.47■■□□□ 1.03
FOXA1-203ENST00000553751 RUNX3Q13761 415 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 KCNJ12Q14500 433 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 STX1AQ16623 288 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 PKDCCQ504Y2 493 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 GJB7Q6PEY0 223 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 C1orf228Q6PIY5 440 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 SASS6Q6UVJ0 657 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 CLDN23Q96B33 292 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 CHFRQ96EP1 664 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 NDST4Q9H3R1 872 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 NMUR1Q9HB89 426 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 CYLDQ9NQC7 956 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 ANO10Q9NW15 660 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 DUS2Q9NX74 493 aaKnown RBP21.47■■□□□ 1.03
FOXA1-203ENST00000553751 HESX1Q9UBX0 185 aa21.47■■□□□ 1.03
FOXA1-203ENST00000553751 XPO1O14980 1071 aaKnown RBP21.46■■□□□ 1.03
FOXA1-203ENST00000553751 TLR5O60602 858 aa21.46■■□□□ 1.03
FOXA1-203ENST00000553751 PRKCSHP14314 528 aaPredicted RBP21.46■■□□□ 1.03
FOXA1-203ENST00000553751 BRD2P25440 801 aaKnown RBP21.46■■□□□ 1.03
FOXA1-203ENST00000553751 EEF1GP26641 437 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms