RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SLC1A4P43007 532 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 EPHA7Q15375 998 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 LY6KQ17RY6 165 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 TTC38Q5R3I4 469 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 SPOUT1Q5T280 376 aaKnown RBP6.79□□□□□ -1.32
ATXN3-223ENST00000553686 N4BP2L1Q5TBK1 243 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-223ENST00000553686 IL31Q6EBC2 164 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 SLFN12LQ6IEE8 588 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 XRRA1Q6P2D8 792 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 UNQ6494/PRO21346Q6UXR6 183 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 KIAA0907Q7Z7F0 614 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-223ENST00000553686 ZNF444Q8N0Y2 327 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-223ENST00000553686 AHI1Q8N157 1196 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 C12orf65Q9H3J6 166 aaKnown RBP6.79□□□□□ -1.32
ATXN3-223ENST00000553686 IGSF9Q9P2J2 1179 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 MAGEL2Q9UJ55 1249 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 LZTS1Q9Y250 596 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 PLAAQ9Y263 795 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 CEP295Q9C0D2 2601 aa6.79□□□□□ -1.32
ATXN3-223ENST00000553686 ASH1LQ9NR48 2969 aaKnown RBP6.78□□□□□ -1.32
ATXN3-223ENST00000553686 ARHGAP6O43182 974 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 LRP3O75074 770 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 ZNF623O75123 536 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 FGF18O76093 207 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 PRLP01236 227 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 DCNP07585 359 aaKnown RBP6.78□□□□□ -1.32
ATXN3-223ENST00000553686 INSRRP14616 1297 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 CR2P20023 1033 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 TGM1P22735 817 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 SCNN1BP51168 640 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 ARHGAP1Q07960 439 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 ADCY1Q08828 1119 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 AGBL4Q5VU57 503 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 CREB3L3Q68CJ9 461 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 RNF207Q6ZRF8 634 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 THNSL1Q8IYQ7 743 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 LCORLQ8N3X6 602 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 TET1Q8NFU7 2136 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 PPTC7Q8NI37 304 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 CHTF18Q8WVB6 975 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 MFSD3Q96ES6 412 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
ATXN3-223ENST00000553686 OR10A2Q9H208 303 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 EPC1Q9H2F5 836 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 TBC1D17Q9HA65 648 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 CD248Q9HCU0 757 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 THG1LQ9NWX6 298 aaKnown RBP6.78□□□□□ -1.32
ATXN3-223ENST00000553686 ZSCAN32Q9NX65 697 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 MTMR4Q9NYA4 1195 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 SAE1Q9UBE0 346 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-223ENST00000553686 CDK5RAP2Q96SN8 1893 aa6.78□□□□□ -1.32
ATXN3-223ENST00000553686 ZNF532Q9HCE3 1301 aa6.77□□□□□ -1.32
ATXN3-223ENST00000553686 FRYLO94915 3013 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 CYP2D7A0A087X1C5 515 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 TLDC2A0PJX2 215 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 EIF4E1BA6NMX2 242 aaKnown RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 PATE3B3GLJ2 98 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 TAF4O00268 1085 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 FOXS1O43638 330 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 PRKAB2O43741 272 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 MAFO75444 373 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 ARIH2O95376 493 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 ARP10275 920 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 ZNF20P17024 532 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 RARSP54136 660 aaKnown RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 ANTXR2P58335 489 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 DSG1Q02413 1049 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 KRT17Q04695 432 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 CSTF1Q05048 431 aaKnown RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 NFYCQ13952 458 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 SART3Q15020 963 aaKnown RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 STXBP2Q15833 593 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 ZXDCQ2QGD7 858 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 PRAMEF9Q5VWM5 478 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 KIAA1841Q6NSI8 718 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 CTR9Q6PD62 1173 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 FAM43BQ6ZT52 329 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 SEPT14Q6ZU15 432 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 RSPH3Q86UC2 560 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 PASD1Q8IV76 773 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 BCL6BQ8N143 479 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 PPM1KQ8N3J5 372 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 ZBTB44Q8NCP5 570 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 Q8TCH9 128 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 SSH1Q8WYL5 1049 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 DVL3Q92997 716 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 MEIS3Q99687 375 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 C1QTNF3Q9BXJ4 246 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 FTHL17Q9BXU8 183 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 API5Q9BZZ5 524 aaKnown RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 CCDC8Q9H0W5 538 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 ARMT1Q9H993 441 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 DLGAP2Q9P1A6 1054 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 OAZ3Q9UMX2 235 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 ZFR2Q9UPR6 939 aaKnown RBP6.77□□□□□ -1.33
ATXN3-223ENST00000553686 SIP14410 1827 aa6.77□□□□□ -1.33
ATXN3-223ENST00000553686 MYH13Q9UKX3 1938 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms