RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 KRT4P19013 534 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SP100P23497 879 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 ETV3P41162 512 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 SKIV2L2P42285 1042 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 GALK1P51570 392 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 TPD52P55327 224 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 AP2B1P63010 937 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 COG7P83436 770 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CAMK2DQ13557 499 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 KARSQ15046 597 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 CAVIN4Q5BKX8 364 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 PRRT3Q5FWE3 981 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 FAM47CQ5HY64 1035 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 TOR2AQ5JU69 321 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ZNF362Q5T0B9 420 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 TATDN1Q6P1N9 297 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 KLC3Q6P597 504 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 OR6J1Q8NGC5 347 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CDC26Q8NHZ8 85 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 LENG1Q96BZ8 264 aaPredicted RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 MXD3Q9BW11 206 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 LRRC2Q9BYS8 371 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 NUF2Q9BZD4 464 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 EPS8L2Q9H6S3 715 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 ZNF287Q9HBT7 754 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 NCOA5Q9HCD5 579 aaKnown RBP4.22□□□□□ -1.73
RDH11-204ENST00000553578 TRPC7Q9HCX4 862 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 DGKBQ9Y6T7 804 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 CNTNAP5Q8WYK1 1306 aa4.22□□□□□ -1.73
RDH11-204ENST00000553578 WDR64B1ANS9 1081 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 PRRT4C9JH25 899 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 STMND1H3BQB6 276 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 IKBKBO14920 756 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 SYF2O95926 243 aaKnown RBP4.21□□□□□ -1.73
RDH11-204ENST00000553578 BMP15O95972 392 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 PAHP00439 452 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 SPARCP09486 303 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 GLULP15104 373 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 PAMP19021 973 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 HIBADHP31937 336 aaKnown RBP4.21□□□□□ -1.73
RDH11-204ENST00000553578 AARSP49588 968 aaKnown RBP eCLIP4.21□□□□□ -1.73
RDH11-204ENST00000553578 TUBP50607 506 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 HSD17B7P56937 341 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 NLRP12P59046 1061 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 TUBA4AP68366 448 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 COG2Q14746 738 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 GRM4Q14833 912 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 ARL6IP4Q66PJ3 421 aaKnown RBP4.21□□□□□ -1.73
RDH11-204ENST00000553578 IRGCQ6NXR0 463 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 TUBA3EQ6PEY2 450 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 CACNA2D3Q8IZS8 1091 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 MRPS27Q92552 414 aaKnown RBP4.21□□□□□ -1.73
RDH11-204ENST00000553578 SIPA1Q96FS4 1042 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 SYT15Q9BQS2 421 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 ACAT2Q9BWD1 397 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 CCDC177Q9NQR7 707 aaPredicted RBP4.21□□□□□ -1.73
RDH11-204ENST00000553578 ITM2CQ9NQX7 267 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 ETNK2Q9NVF9 386 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.21□□□□□ -1.73
RDH11-204ENST00000553578 BTBD7Q9P203 1132 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 KCNMB2Q9Y691 235 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 SLC4A4Q9Y6R1 1079 aa4.21□□□□□ -1.73
RDH11-204ENST00000553578 LAD1O00515 517 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 ATP9AO75110 1047 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 DEXIO95424 95 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 TGDSO95455 350 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 KRT75O95678 551 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 AKR1B1P15121 316 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 GRIA2P42262 883 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 SEC24CP53992 1094 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 GPLD1P80108 840 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 SERINC3Q13530 473 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 ECM1Q16610 540 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 PTGISQ16647 500 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 HSP90AA4PQ58FG1 418 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 MRM1Q6IN84 353 aaKnown RBP4.21□□□□□ -1.74
RDH11-204ENST00000553578 TMTC3Q6ZXV5 915 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 NLRP14Q86W24 1093 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 THNSL2Q86YJ6 484 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 TMEM151BQ8IW70 566 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 SRBD1Q8N5C6 995 aaKnown RBP4.21□□□□□ -1.74
RDH11-204ENST00000553578 TBC1D16Q8TBP0 767 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 IFT81Q8WYA0 676 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 ZNF75CPQ92670 426 aaPredicted RBP4.21□□□□□ -1.74
RDH11-204ENST00000553578 ZUFSPQ96AP4 578 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 FUBP3Q96I24 572 aaKnown RBP eCLIP4.21□□□□□ -1.74
RDH11-204ENST00000553578 NSMCE3Q96MG7 304 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 CCT8L2Q96SF2 557 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 ERP44Q9BS26 406 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 DESI2Q9BSY9 194 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 TRIM8Q9BZR9 551 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 HSD3B7Q9H2F3 369 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 RIOX1Q9H6W3 641 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 C8orf4Q9NR00 106 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 APPL1Q9UKG1 709 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 RUVBL1Q9Y265 456 aaKnown RBP4.21□□□□□ -1.74
RDH11-204ENST00000553578 GIT1Q9Y2X7 761 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 PCDHA2Q9Y5H9 948 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 DOCK5Q9H7D0 1870 aa4.21□□□□□ -1.74
RDH11-204ENST00000553578 LCTP09848 1927 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms