RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SPATA18Q8TC71 538 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 APBB2Q92870 758 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 RTP4Q96DX8 246 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 TSPAN18Q96SJ8 248 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 ARHGAP39Q9C0H5 1083 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 PDGFCQ9NRA1 345 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 AGAP1Q9UPQ3 857 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 TNPO2O14787 897 aaKnown RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 MDM4O15151 490 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 TSPAN1O60635 241 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 PDGFRAP16234 1089 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 SCNN1AP37088 669 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 NDST1P52848 882 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 WDR4P57081 412 aaKnown RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 GPX6P59796 221 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 DYNLT1P63172 113 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 SP3Q02447 781 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 DPYSL3Q14195 570 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 MTHFD1LQ6UB35 978 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 C3orf62Q6ZUJ4 267 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 GPR142Q7Z601 462 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 UNC93AQ86WB7 457 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 EMC1Q8N766 993 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 LRRC52Q8N7C0 313 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 ZNF398Q8TD17 642 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 ACSF2Q96CM8 615 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 CYTH2Q99418 400 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 CALN1Q9BXU9 219 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 CYLDQ9NQC7 956 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 ABCF3Q9NUQ8 709 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 PAK5Q9P286 719 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 TJP2Q9UDY2 1190 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 CLUHO75153 1309 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 H3BRB1 525 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 CA4P22748 312 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 ALDH3A1P30838 453 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 YARSP54577 528 aaKnown RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 GDF10P55107 478 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 IGBP1P78318 339 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 ELF3P78545 371 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 PKN2Q16513 984 aaKnown RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 MAMDC4Q6UXC1 1216 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 PLEKHH3Q7Z736 793 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 SESTD1Q86VW0 696 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 CDR2LQ86X02 465 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 PALM2Q8IXS6 379 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 CD99L2Q8TCZ2 262 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 LRRC8CQ8TDW0 803 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 FBF1Q8TES7 1133 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 NLRP7Q8WX94 980 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 HSPH1Q92598 858 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 RNF157Q96PX1 679 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 C16orf70Q9BSU1 422 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 CFHR5Q9BXR6 569 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 TUT1Q9H6E5 874 aaKnown RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 PRDM16Q9HAZ2 1276 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 HMGXB4Q9UGU5 601 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 PCSK1NQ9UHG2 260 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 XPO7Q9UIA9 1087 aaKnown RBP13.48□□□□□ -0.25
SHMT2-205ENST00000553474 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
SHMT2-205ENST00000553474 RRN3P2A6NIE6 340 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 DCTN3O75935 186 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 FAM155BO75949 473 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 UBOX5O94941 541 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 GSTA2P09210 222 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 CCNB1P14635 433 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 MSH2P43246 934 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 MAGEA6P43360 314 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 PSMC4P43686 418 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 CDH6P55285 790 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 FCGRTP55899 365 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 SETDB1Q15047 1291 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 TMEM110Q86TL2 294 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 UNC45BQ8IWX7 931 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 FBXO36Q8NEA4 188 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 RXFP2Q8WXD0 754 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 LRRC39Q96DD0 335 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 ZNF670Q9BS34 389 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 SLC4A5Q9BY07 1137 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 PNPLA8Q9NP80 782 aa13.47□□□□□ -0.25
SHMT2-205ENST00000553474 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.47□□□□□ -0.25
SHMT2-205ENST00000553474 SAE1Q9UBE0 346 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-205ENST00000553474 TRIP11Q15643 1979 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 IQANK1A0A1B0GTG1 560 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 ATP2C2O75185 946 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 CD48P09326 243 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 ZFXP17010 805 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-205ENST00000553474 ADORA2AP29274 412 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 CTGFP29279 349 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 IRF5Q13568 498 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 KCNJ11Q14654 390 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 PKDCCQ504Y2 493 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 HHATQ5VTY9 493 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 OR6B2Q6IFH4 312 aa13.46□□□□□ -0.25
SHMT2-205ENST00000553474 DARS2Q6PI48 645 aaKnown RBP13.46□□□□□ -0.25
SHMT2-205ENST00000553474 FAM183BPQ6ZVS7 135 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms