RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 NELFCDQ8IXH7 590 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 PGBD3Q8N328 593 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 CCDC33Q8N5R6 958 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 RIN3Q8TB24 985 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 TCEAL3Q969E4 200 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 HPS3Q969F9 1004 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 SPATA17Q96L03 361 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 ELOVL4Q9GZR5 314 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 CUEDC2Q9H467 287 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 FBRSL1Q9HCM7 1045 aaKnown RBP10.56□□□□□ -0.72
ACTN1-208ENST00000553370 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
ACTN1-208ENST00000553370 CPQQ9Y646 472 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 FRYQ5TBA9 3013 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 UBE4BO95155 1302 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 PTPRJQ12913 1337 aa10.56□□□□□ -0.72
ACTN1-208ENST00000553370 FRMD3A2A2Y4 597 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 A8MXQ7 604 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 GABRDO14764 452 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 KHNYNO15037 678 aaKnown RBP10.55□□□□□ -0.72
ACTN1-208ENST00000553370 DCLK1O15075 740 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 CLIC2O15247 247 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 SPTLC2O15270 562 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 EIF3DO15371 548 aaKnown RBP eCLIP10.55□□□□□ -0.72
ACTN1-208ENST00000553370 STX6O43752 255 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 LMO2P25791 158 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 NOVA1P51513 510 aaKnown RBP10.55□□□□□ -0.72
ACTN1-208ENST00000553370 WDR72Q3MJ13 1102 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 FAM26FQ5R3K3 315 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 BTBD8Q5XKL5 378 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 PSAPL1Q6NUJ1 521 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 FAM171BQ6P995 826 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 SCARA5Q6ZMJ2 495 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 TRAPPC11Q7Z392 1133 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 IQUBQ8NA54 791 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 PDZD8Q8NEN9 1154 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 MYCBPAPQ8TBZ2 947 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 KBTBD7Q8WVZ9 684 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 FBXO32Q969P5 355 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 PCED1BQ96HM7 432 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 ZC3H10Q96K80 434 aaKnown RBP10.55□□□□□ -0.72
ACTN1-208ENST00000553370 CEP295NLQ96MC4 621 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 PKMYT1Q99640 499 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 CGRRF1Q99675 332 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 DUSP15Q9H1R2 295 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-208ENST00000553370 POLMQ9NP87 494 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-208ENST00000553370 CRTAC1Q9NQ79 661 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 CFAP97Q9P2B7 532 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 SH3BP1Q9Y3L3 701 aa10.55□□□□□ -0.72
ACTN1-208ENST00000553370 A0A087X0B3 334 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 ZBTB24O43167 697 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 EXOC3O60645 756 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 RTN3O95197 1032 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 KLF8O95600 359 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 CYP17A1P05093 508 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 ADH5P11766 374 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 CYP24A1Q07973 514 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 VAC14Q08AM6 782 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 ZNF699Q32M78 642 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 UAP1L1Q3KQV9 507 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 N4BP2L1Q5TBK1 243 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 FOXD4L5Q5VV16 416 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 XXYLT1Q8NBI6 393 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 USP33Q8TEY7 942 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 WHAMMQ8TF30 809 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 LRRN4Q8WUT4 740 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 HMGB4Q8WW32 186 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 FOXD4L4Q8WXT5 416 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 SYAP1Q96A49 352 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 PNKPQ96T60 521 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 MRPL45Q9BRJ2 306 aaKnown RBP10.54□□□□□ -0.72
ACTN1-208ENST00000553370 TRIM9Q9C026 710 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 LINC00597Q9H2U6 94 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 ARHGEF4Q9NR80 690 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 AGPAT3Q9NRZ7 376 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 FAM13BQ9NYF5 915 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 GCNT4Q9P109 453 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 EBF1Q9UH73 591 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 MMP17Q9ULZ9 603 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 CFAP47Q6ZTR5 3102 aa10.54□□□□□ -0.72
ACTN1-208ENST00000553370 BCLAF3A2AJT9 711 aaKnown RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 ZNF840PA6NDX5 716 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 C4orf47A7E2U8 309 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 CFAP99D6REC4 459 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 IRF1P10914 325 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 P4HA1P13674 534 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 TCF3P15923 654 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 PTPN1P18031 435 aaKnown RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 YWHAQP27348 245 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 ME1P48163 572 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 NOP14P78316 857 aaKnown RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 TAF10Q12962 218 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 BYSLQ13895 437 aaKnown RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 DHCR24Q15392 516 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 ANO4Q32M45 955 aa10.53□□□□□ -0.72
ACTN1-208ENST00000553370 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 PREPLQ4J6C6 727 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-208ENST00000553370 ZNF667Q5HYK9 610 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms