RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 CPQQ9Y646 472 aa12.63□□□□□ -0.39
SNRPF-205ENST00000553192 MYOFQ9NZM1 2061 aa12.63□□□□□ -0.39
SNRPF-205ENST00000553192 H0Y8X5 98 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 SLC9A3R1O14745 358 aaPredicted RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 CPLX1O14810 134 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 CLDN3O15551 220 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 XPOTO43592 962 aaKnown RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 HIP1RO75146 1068 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 ACTN2P35609 894 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 TMPRSS3P57727 454 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 FBXL19Q6PCT2 694 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 KIAA1324Q6UXG2 1013 aaKnown RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 ZPBP2Q6X784 338 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 METTL3Q86U44 580 aaKnown RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 CHPFQ8IZ52 775 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 SNRNP27Q8WVK2 155 aaKnown RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 NAF1Q96HR8 494 aaKnown RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 CFAP97Q9P2B7 532 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 FTSJ1Q9UET6 329 aa12.62□□□□□ -0.39
SNRPF-205ENST00000553192 RBM19Q9Y4C8 960 aaKnown RBP12.62□□□□□ -0.39
SNRPF-205ENST00000553192 WASH3PC4AMC7 463 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 ZBTB24O43167 697 aaPredicted RBP12.61□□□□□ -0.39
SNRPF-205ENST00000553192 HOXC11O43248 304 aaPredicted RBP12.61□□□□□ -0.39
SNRPF-205ENST00000553192 TRAK2O60296 914 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 PFKLP17858 780 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 USP46P62068 366 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 GAD2Q05329 585 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 DNAJC3Q13217 504 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 NFE2Q16621 373 aaPredicted RBP12.61□□□□□ -0.39
SNRPF-205ENST00000553192 KCNT1Q5JUK3 1230 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 FSIP1Q8NA03 581 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 SPIRE2Q8WWL2 714 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 TSC1Q92574 1164 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 LGMNQ99538 433 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 NTPCRQ9BSD7 190 aaKnown RBP12.61□□□□□ -0.39
SNRPF-205ENST00000553192 ITM2CQ9NQX7 267 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 DEC1Q9P2X7 70 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 NBPF19A0A087WUL8 3843 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 SCN1AP35498 2009 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 FLNCQ14315 2725 aa12.61□□□□□ -0.39
SNRPF-205ENST00000553192 SFI1A8K8P3 1242 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 PRRT4C9JH25 899 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 ENC1O14682 589 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 PAPSS1O43252 624 aaPredicted RBP12.6□□□□□ -0.39
SNRPF-205ENST00000553192 RFPL3O75679 317 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 GP1BBP13224 206 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 ACAT1P24752 427 aaKnown RBP12.6□□□□□ -0.39
SNRPF-205ENST00000553192 ACADVLP49748 655 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 CCT8P50990 548 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 IL9RQ01113 521 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 PDIA5Q14554 519 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 LAYNQ6UX15 382 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 ZNF248Q8NDW4 579 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 TMEM161BQ8NDZ6 487 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 IGSF8Q969P0 613 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 HIC2Q96JB3 615 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 DRC1Q96MC2 740 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 TSPAN18Q96SJ8 248 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 MKRN2Q9H000 416 aaKnown RBP12.6□□□□□ -0.39
SNRPF-205ENST00000553192 GTF3C4Q9UKN8 822 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 ANKRD6Q9Y2G4 727 aa12.6□□□□□ -0.39
SNRPF-205ENST00000553192 AHCTF1Q8WYP5 2266 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 E2F8A0AVK6 867 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 ZNF840PA6NDX5 716 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 HCRTO43612 131 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 OAS1P00973 400 aaKnown RBP12.59□□□□□ -0.39
SNRPF-205ENST00000553192 MAPTP10636 758 aaKnown RBP12.59□□□□□ -0.39
SNRPF-205ENST00000553192 GRIK1P39086 918 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 TAF6P49848 677 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 PDE6CP51160 858 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 AFF3P51826 1226 aaKnown RBP12.59□□□□□ -0.39
SNRPF-205ENST00000553192 UCNP55089 124 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 TSPY1Q01534 308 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 NFATC3Q12968 1075 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 STRN3Q13033 797 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 STK3Q13188 491 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 FUT11Q495W5 492 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 INTS6LQ5JSJ4 861 aaKnown RBP12.59□□□□□ -0.39
SNRPF-205ENST00000553192 TMEM25Q86YD3 366 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 SCN4BQ8IWT1 228 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 ENGASEQ8NFI3 743 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 RUSC1Q9BVN2 902 aa12.59□□□□□ -0.39
SNRPF-205ENST00000553192 RPF1Q9H9Y2 349 aaKnown RBP12.59□□□□□ -0.39
SNRPF-205ENST00000553192 LRRK2Q5S007 2527 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 IGLV3-19P01714 112 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 C1SP09871 688 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 MUTP22033 750 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 KRT2P35908 639 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 MATR3P43243 847 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNRPF-205ENST00000553192 TPMTP51580 245 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 VAC14Q08AM6 782 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 KIAA1614Q5VZ46 1190 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 SDE2Q6IQ49 451 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 GATAD2AQ86YP4 633 aa12.58□□□□□ -0.4
SNRPF-205ENST00000553192 PDCL2Q8N4E4 241 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms