RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MESP2Q0VG99 397 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 TAF10Q12962 218 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 PSMD6Q15008 389 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 SNRNP35Q16560 246 aaKnown RBP12.6□□□□□ -0.39
CKAP4-202ENST00000552828 SPDYCQ5MJ68 293 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 TDRD10Q5VZ19 366 aaKnown RBP12.6□□□□□ -0.39
CKAP4-202ENST00000552828 TMEM92Q6UXU6 159 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 DDX42Q86XP3 938 aaKnown RBP eCLIP12.6□□□□□ -0.39
CKAP4-202ENST00000552828 GRAMD1CQ8IYS0 662 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 CCDC33Q8N5R6 958 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 IL17RCQ8NAC3 791 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 OVCA2Q8WZ82 227 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 HPS3Q969F9 1004 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 PNKPQ96T60 521 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 CGRRF1Q99675 332 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
CKAP4-202ENST00000552828 TPSD1Q9BZJ3 242 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 ELOVL4Q9GZR5 314 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 GZF1Q9H116 711 aaPredicted RBP12.6□□□□□ -0.39
CKAP4-202ENST00000552828 SNX25Q9H3E2 840 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 TMEM9BQ9NQ34 198 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 AGPAT3Q9NRZ7 376 aa12.6□□□□□ -0.39
CKAP4-202ENST00000552828 EVLQ9UI08 416 aaPredicted RBP12.6□□□□□ -0.39
CKAP4-202ENST00000552828 ANAPC1Q9H1A4 1944 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 WDFY3Q8IZQ1 3526 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 SPEGQ15772 3267 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 ATG2BQ96BY7 2078 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 E2F8A0AVK6 867 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 GIPC1O14908 333 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 ALDH1A2O94788 518 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 KAT7O95251 611 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 ADH1CP00326 375 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 CEACAM1P13688 526 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 P2RY2P41231 377 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 GRIA2P42262 883 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 TNFRSF4P43489 277 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 CYP24A1Q07973 514 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 EHHADHQ08426 723 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 WDR72Q3MJ13 1102 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 FAM26FQ5R3K3 315 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 SNX30Q5VWJ9 437 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 CYP2U1Q7Z449 544 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 SFTPA1Q8IWL2 248 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 FMR1NBQ8N0W7 255 aaPredicted RBP12.59□□□□□ -0.39
CKAP4-202ENST00000552828 PHTF2Q8N3S3 785 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 ALLCQ8N6M5 410 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 OTUB2Q96DC9 234 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
CKAP4-202ENST00000552828 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 B3GNT5Q9BYG0 378 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 ZNF518BQ9C0D4 1074 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 XYLT2Q9H1B5 865 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 SMPD4Q9NXE4 827 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 IL37Q9NZH6 218 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 CFAP97Q9P2B7 532 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 TBC1D14Q9P2M4 693 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 KIAA1549LQ6ZVL6 1849 aa12.59□□□□□ -0.39
CKAP4-202ENST00000552828 ZNF638Q14966 1978 aaKnown RBP12.59□□□□□ -0.39
CKAP4-202ENST00000552828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.58□□□□□ -0.4
CKAP4-202ENST00000552828 PATE3B3GLJ2 98 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 SGK1O00141 431 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 TNFRSF10BO14763 440 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 ADAM23O75077 832 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 RTN3O95197 1032 aaPredicted RBP12.58□□□□□ -0.4
CKAP4-202ENST00000552828 APODP05090 189 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 DLATP10515 647 aaKnown RBP12.58□□□□□ -0.4
CKAP4-202ENST00000552828 IGF2RP11717 2491 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 TNNI1P19237 187 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 YWHAQP27348 245 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 ATICP31939 592 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 IRX4P78413 519 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 HS2ST1Q7LGA3 356 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 C12orf40Q86WS4 652 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 NUP93Q8N1F7 819 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 XXYLT1Q8NBI6 393 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 TXNDC5Q8NBS9 432 aaKnown RBP12.58□□□□□ -0.4
CKAP4-202ENST00000552828 B3GALNT2Q8NCR0 500 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 ENGASEQ8NFI3 743 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 OR6B3Q8NGW1 331 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 WHAMMQ8TF30 809 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 SCFD1Q8WVM8 642 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 ZNF516Q92618 1163 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 CCDC47Q96A33 483 aaKnown RBP12.58□□□□□ -0.4
CKAP4-202ENST00000552828 DPEP3Q9H4B8 488 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 VRTNQ9H8Y1 702 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 UBE4BO95155 1302 aa12.58□□□□□ -0.4
CKAP4-202ENST00000552828 AKAP13Q12802 2813 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 A8MXQ7 604 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 COCHO43405 550 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 KLRC4O43908 158 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 GADD45BO75293 160 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 KLF8O95600 359 aaPredicted RBP12.57□□□□□ -0.4
CKAP4-202ENST00000552828 ABL1P00519 1130 aa12.57□□□□□ -0.4
CKAP4-202ENST00000552828 ZDHHC11BP0C7U3 371 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms