RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	NGRN	Q9NPE2	291 aa	Known RBP	7.19	□□□□□ -1.26
CNOT2-238	ENST00000552422	PRDM7	Q9NQW5	492 aa		7.19	□□□□□ -1.26
CNOT2-238	ENST00000552422	ENTPD7	Q9NQZ7	604 aa		7.19	□□□□□ -1.26
CNOT2-238	ENST00000552422	RMND1	Q9NWS8	449 aa		7.19	□□□□□ -1.26
CNOT2-238	ENST00000552422	HSPBP1	Q9NZL4	362 aa		7.19	□□□□□ -1.26
CNOT2-238	ENST00000552422	TUBGCP4	Q9UGJ1	667 aa		7.19	□□□□□ -1.26
CNOT2-238	ENST00000552422	DERA	Q9Y315	318 aa		7.19	□□□□□ -1.26
CNOT2-238	ENST00000552422	C2CD2	Q9Y426	696 aa		7.19	□□□□□ -1.26
CNOT2-238	ENST00000552422	SF3B1	O75533	1304 aa	Known RBP eCLIP	7.19	□□□□□ -1.26	4e-7	■■■■■ 108
CNOT2-238	ENST00000552422	FSD2	A1L4K1	749 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	C2orf71	A6NGG8	1288 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	HIDE1	A8MVS5	230 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	PRR33	A8MZF0	331 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	PDXK	O00764	312 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	KIF20A	O95235	890 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	IL18RAP	O95256	599 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	SMC2	O95347	1197 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	SOD2	P04179	222 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	CTSA	P10619	480 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	CYP3A5	P20815	502 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	LRPAP1	P30533	357 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	RPL9	P32969	192 aa	Known RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	CLCNKB	P51801	687 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	SPAG1	Q07617	926 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	HYAL1	Q12794	435 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	ELAVL2	Q12926	359 aa	Known RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	SMC1A	Q14683	1233 aa	Known RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	TMEM132D	Q14C87	1099 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	PTPN14	Q15678	1187 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	SNRNP35	Q16560	246 aa	Known RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	ZCWPW2	Q504Y3	356 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	COBLL1	Q53SF7	1204 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	CDKAL1	Q5VV42	579 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	PLPP4	Q5VZY2	271 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	JADE1	Q6IE81	842 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	OGFOD2	Q6N063	350 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	FUT10	Q6P4F1	479 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	DCLRE1A	Q6PJP8	1040 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	NT5DC4	Q86YG4	428 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	KRTAP1-3	Q8IUG1	177 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	EFCAB13	Q8IY85	973 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	GPR65	Q8IYL9	337 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	MRPL43	Q8N983	215 aa	Known RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	RIN3	Q8TB24	985 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	HASPIN	Q8TF76	798 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	RABGGTA	Q92696	567 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	ERCC4	Q92889	916 aa	Predicted RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	SMARCE1	Q969G3	411 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	PPP2R3C	Q969Q6	453 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	CRELD1	Q96HD1	420 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	DPH2	Q9BQC3	489 aa	Predicted RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	FAM213A	Q9BRX8	229 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	HERC2P3	Q9BVR0	1158 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	GPR62	Q9BZJ7	368 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	GZF1	Q9H116	711 aa	Predicted RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	PCIF1	Q9H4Z3	704 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	KIAA1586	Q9HCI6	787 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	CHST7	Q9NS84	486 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	LMBRD1	Q9NUN5	540 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	RBAK	Q9NYW8	714 aa	Predicted RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	VTI1B	Q9UEU0	232 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	UBQLN1	Q9UMX0	589 aa	Known RBP	7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	PCDHA5	Q9Y5H7	936 aa		7.18	□□□□□ -1.26
CNOT2-238	ENST00000552422	PATJ	Q8NI35	1801 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	ANAPC1	Q9H1A4	1944 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	GOLGA8IP	A6NC78	632 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	GOLGA8J	A6NMD2	632 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	PODXL	O00592	558 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	CLIC2	O15247	247 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	XPOT	O43592	962 aa	Known RBP	7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	NCK2	O43639	380 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	TBX10	O75333	385 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	B3GAT3	O94766	335 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	CBX7	O95931	251 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	UROD	P06132	367 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	IGFBP6	P24592	240 aa	Predicted RBP	7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.17	□□□□□ -1.26	2e-9	■■■■■ 41.8
CNOT2-238	ENST00000552422	GLUD2	P49448	558 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	AARS	P49588	968 aa	Known RBP eCLIP	7.17	□□□□□ -1.26	4e-6	■□□□□ 9.4
CNOT2-238	ENST00000552422	CYP2J2	P51589	502 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	DSG1	Q02413	1049 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	RPL6	Q02878	288 aa	Known RBP	7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	KCNC3	Q14003	757 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	BMS1	Q14692	1282 aa	Known RBP	7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	NFIL3	Q16649	462 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	DUSP6	Q16828	381 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	USP41	Q3LFD5	358 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	RTP2	Q5QGT7	225 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	ZNF658	Q5TYW1	1059 aa	Predicted RBP	7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	SPATA1	Q5VX52	437 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	CD300LG	Q6UXG3	332 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	CBWD2	Q8IUF1	395 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	EFHB	Q8N7U6	833 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	XXYLT1	Q8NBI6	393 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	PHC3	Q8NDX5	983 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	BEST2	Q8NFU1	509 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	MICAL1	Q8TDZ2	1067 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	AUTS2	Q8WXX7	1259 aa		7.17	□□□□□ -1.26
CNOT2-238	ENST00000552422	PPM1E	Q8WY54	764 aa		7.17	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms