RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 TRIM11Q96F44 468 aa8.56□□□□□ -1.04
CHPT1-208ENST00000552215 EPB41L5Q9HCM4 733 aa8.56□□□□□ -1.04
CHPT1-208ENST00000552215 CNTN3Q9P232 1028 aa8.56□□□□□ -1.04
CHPT1-208ENST00000552215 COG5Q9UP83 839 aa8.56□□□□□ -1.04
CHPT1-208ENST00000552215 CST8O60676 142 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 EOMESO95936 686 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 PROZP22891 400 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 GBP2P32456 591 aaPredicted RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 NFIL3Q16649 462 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 UPP1Q16831 310 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 PLEKHG4Q58EX7 1191 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 LRRC52Q8N7C0 313 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 UBLCP1Q8WVY7 318 aaPredicted RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 PABPC5Q96DU9 382 aaKnown RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 SMARCD1Q96GM5 515 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 WDCPQ9H6R7 721 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 DMAP1Q9NPF5 467 aaPredicted RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 CRTAC1Q9NQ79 661 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 GKN1Q9NS71 199 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 YJEFN3A6XGL0 299 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 E7ENQ6 273 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 ABLIM1O14639 778 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 ZBED1O96006 694 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 RPLP2P05387 115 aaKnown RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 TMEM253P0C7T8 217 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 YWHAQP27348 245 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 ARHGAP25P42331 645 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 MAGEA10P43363 369 aaPredicted RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 GLUD2P49448 558 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 YWHAZP63104 245 aaKnown RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 PITX1P78337 314 aaPredicted RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 CNGA2Q16280 664 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 NFE2Q16621 373 aaPredicted RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 TMCO3Q6UWJ1 677 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 RNF19BQ6ZMZ0 732 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 GDPD5Q8WTR4 605 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 TRIM51Q9BSJ1 452 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 SUDS3Q9H7L9 328 aaPredicted RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 IP6K2Q9UHH9 426 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 NCOR1O75376 2440 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 RPL9P32969 192 aaKnown RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 TWF1Q12792 350 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 MAMLD1Q13495 774 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 ANO4Q32M45 955 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 TRIM72Q6ZMU5 477 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 MAP7D3Q8IWC1 876 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 FUKQ8N0W3 1084 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 NOA1Q8NC60 698 aaKnown RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 RPRD1AQ96P16 312 aaPredicted RBP8.55□□□□□ -1.04
CHPT1-208ENST00000552215 ZSWIM1Q9BR11 485 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 NFKBIZQ9BYH8 718 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 UBP1Q9NZI7 540 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 GMIPQ9P107 970 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 VANGL2Q9ULK5 521 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 ZSWIM8A7E2V4 1837 aa8.55□□□□□ -1.04
CHPT1-208ENST00000552215 PGRMC1O00264 195 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 NEFHP12036 1026 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 TCP1P17987 556 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 SAT1P21673 171 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 GABRR2P28476 465 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 RDXP35241 583 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 CYP4F8P98187 520 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 CALCOCO2Q13137 446 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 PPM1LQ5SGD2 360 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 PYROXD2Q8N2H3 581 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 LINC01465Q8N7H1 131 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 NAT16Q8N8M0 369 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 NKX2-4Q9H2Z4 354 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 RABEP2Q9H5N1 569 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 INSL6Q9Y581 213 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 MAD1L1Q9Y6D9 718 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 MAP1BP46821 2468 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 ABHD14A-ACY1A0A1B0GW23 586 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 A0A1W2PQH9 124 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 ZSCAN5CA6NGD5 496 aaPredicted RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 PITPNM1O00562 1244 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 TFE3P19532 575 aaPredicted RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 CACNA2D1P54289 1103 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 GPM6BQ13491 265 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 MEA1Q16626 185 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 EFHC2Q5JST6 749 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 SYPL2Q5VXT5 272 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 ANKRD52Q8NB46 1076 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 MCRS1Q96EZ8 462 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 PPP1R10Q96QC0 940 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 IL23AQ9NPF7 189 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 CDH22Q9UJ99 828 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 SPTBN2O15020 2390 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 TTC28Q96AY4 2481 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 H7C4K7 107 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 MEFVO15553 781 aaPredicted RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 HEXIM1O94992 359 aaKnown RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 PYGMP11217 842 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
CHPT1-208ENST00000552215 AMPD1P23109 780 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 MIPP30301 263 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 SLC5A3P53794 718 aa8.54□□□□□ -1.04
CHPT1-208ENST00000552215 EPHB3P54753 998 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms