RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SIGIRRQ6IA17 410 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 RAPH1Q70E73 1250 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 SV2BQ7L1I2 683 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 GET4Q7L5D6 327 aaPredicted RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF571Q7Z3V5 609 aaPredicted RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ARPINQ7Z6K5 226 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 DHDDSQ86SQ9 333 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 MTDHQ86UE4 582 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ITIH5Q86UX2 942 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 CABP7Q86V35 215 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 MICU3Q86XE3 530 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TMPRSS6Q8IU80 811 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TMEM126BQ8IUX1 230 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TRIM59Q8IWR1 403 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ANKRD35Q8N283 1001 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TMEM151AQ8N4L1 468 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 FANCBQ8NB91 859 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 DDHD1Q8NEL9 900 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 DTX3LQ8TDB6 740 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 GLG1Q92896 1179 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 BORCS5Q969J3 196 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 MRRFQ96E11 262 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 FBXL18Q96ME1 805 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 NLRP4Q96MN2 994 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 DOK1Q99704 481 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 GPATCH1Q9BRR8 931 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 INO80BQ9C086 356 aaPredicted RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 CEP44Q9C0F1 390 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 KLHL4Q9C0H6 718 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 IRF2BPLQ9H1B7 796 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 C1orf21Q9H246 121 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 PARVBQ9HBI1 364 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF287Q9HBT7 754 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 NKIRAS1Q9NYS0 192 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ZSWIM5Q9P217 1185 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 GNPTGQ9UJJ9 305 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 RAB26Q9ULW5 256 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 PCDHA4Q9UN74 947 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 SMG5Q9UPR3 1016 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 ERVK-11Q9UQG0 969 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TRAF3IP3Q9Y228 551 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 MTO1Q9Y2Z2 717 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 NEU2Q9Y3R4 380 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TRIM17Q9Y577 477 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 SLC12A7Q9Y666 1083 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 LRP5O75197 1615 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 CHD1O14646 1710 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 TNRQ92752 1358 aa5.54□□□□□ -1.52
LSM3P2-201ENST00000551246 MYH2Q9UKX2 1941 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 TCRBV5S4A2TA0A5A2 114 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 TBKBP1A7MCY6 615 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 B4E1Z4 1266 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 SPECC1L-ADORA2AF8WAN1 911 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 H0YJX3 145 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 H3BNX3 289 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 H3BSA7 217 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 EYA2O00167 538 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 IRS4O14654 1257 aaPredicted RBP5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 HGSO14964 777 aaPredicted RBP5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 PFDN6O15212 129 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 GYG2O15488 501 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 RNMTO43148 476 aaKnown RBP5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 OPHN1O60890 802 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 CDH16O75309 829 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 HAUS5O94927 633 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 CLPTM1O96005 669 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 FGGP02679 453 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 H2AFZP0C0S5 128 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 TMEM253P0C7T8 217 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 DHRS4L1P0CG22 281 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 THRAP10827 490 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 MYCLP1P12525 358 aaPredicted RBP5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 MYL6BP14649 208 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 PDE6AP16499 860 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 CHRNB2P17787 502 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 ITIH2P19823 946 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 FGFR4P22455 802 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 MAOBP27338 520 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 GABRB3P28472 473 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 CPOXP36551 454 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 PGM1P36871 562 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 FDFT1P37268 417 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 SLCO1A2P46721 670 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 TMED10P49755 219 aaKnown RBP5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 JAM2P57087 298 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 NUP107P57740 925 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 ZNF252P-AS1Q0IIN9 211 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 GALNT2Q10471 571 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 IFIT5Q13325 482 aaKnown RBP5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 AP3B2Q13367 1082 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 RASGRF1Q13972 1273 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 TAF1CQ15572 869 aaPredicted RBP5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 ASIC2Q16515 512 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 TXNRD1Q16881 649 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 LONRF1Q17RB8 773 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 EXOC3L4Q17RC7 722 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 DUOXA2Q1HG44 320 aa5.53□□□□□ -1.52
LSM3P2-201ENST00000551246 TMEM266Q2M3C6 531 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms