RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 C1SP09871 688 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 ARP10275 920 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 HGFP14210 728 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 VEGFAP15692 232 aaPredicted RBP5.73□□□□□ -1.49
LIMA1-205ENST00000550592 PPP3CBP16298 524 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 ADORA2AP29274 412 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 PPM1FP49593 454 aaPredicted RBP5.73□□□□□ -1.49
LIMA1-205ENST00000550592 GATMP50440 423 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 RENBPP51606 427 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 TIAL1Q01085 375 aaKnown RBP eCLIP5.73□□□□□ -1.49
LIMA1-205ENST00000550592 SP2Q02086 613 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 TP53BP2Q13625 1128 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 TANGO2Q6ICL3 276 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 CPXCR1Q8N123 301 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 LNX2Q8N448 690 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 TMEM171Q8WVE6 324 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 OSCP1Q8WVF1 389 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 TBC1D20Q96BZ9 403 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 PTCD3Q96EY7 689 aaKnown RBP5.73□□□□□ -1.49
LIMA1-205ENST00000550592 LTV1Q96GA3 475 aaPredicted RBP5.73□□□□□ -1.49
LIMA1-205ENST00000550592 PLEKHG4BQ96PX9 1271 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 TMEM120AQ9BXJ8 343 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 ACTRT3Q9BYD9 372 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 TPSD1Q9BZJ3 242 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 ZCWPW1Q9H0M4 648 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 TBCCD1Q9NVR7 557 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 SNX14Q9Y5W7 946 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 HS3ST4Q9Y661 456 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 DGKBQ9Y6T7 804 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 KIF21BO75037 1637 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 KIAA0586Q9BVV6 1533 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 CCDC189A1A4V9 331 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 PROM1O43490 865 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 CCNT2O60583 730 aaKnown RBP5.72□□□□□ -1.49
LIMA1-205ENST00000550592 LPXNO60711 386 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 EGR2P11161 476 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-205ENST00000550592 HSD3B1P14060 373 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 NPPBP16860 134 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 EPHA3P29320 983 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 CCT5P48643 541 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 PGDP52209 483 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 NXPH1P58417 271 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 ITIH3Q06033 890 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 FHL3Q13643 280 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 ATP1A4Q13733 1029 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 ABLIM2Q6H8Q1 611 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 VWA1Q6PCB0 445 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 ZNF354CQ86Y25 554 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 IZUMO1Q8IYV9 350 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 B3GALNT2Q8NCR0 500 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 SSH3Q8TE77 659 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 ATG4AQ8WYN0 398 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 LPIN2Q92539 896 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 HAS1Q92839 578 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 ZBTB45Q96K62 511 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-205ENST00000550592 HIST1H2AAQ96QV6 131 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 PRPF18Q99633 342 aaKnown RBP5.72□□□□□ -1.49
LIMA1-205ENST00000550592 PAGR1Q9BTK6 254 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 KATNAL1Q9BW62 490 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 INO80BQ9C086 356 aaPredicted RBP5.72□□□□□ -1.49
LIMA1-205ENST00000550592 HELLSQ9NRZ9 838 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 SCAF8Q9UPN6 1271 aaKnown RBP5.72□□□□□ -1.49
LIMA1-205ENST00000550592 GPR52Q9Y2T5 361 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 FHAD1B1AJZ9 1412 aa5.72□□□□□ -1.49
LIMA1-205ENST00000550592 AGPSO00116 658 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 TNFRSF6BO95407 300 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 DHRS4L1P0CG22 281 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 PTGS2P35354 604 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 ATXN1P54253 815 aaKnown RBP5.71□□□□□ -1.5
LIMA1-205ENST00000550592 POLE2P56282 527 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 SF3B3Q15393 1217 aaKnown RBP5.71□□□□□ -1.5
LIMA1-205ENST00000550592 SPATS1Q496A3 300 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 DEPDC1Q5TB30 811 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 GATAD2AQ86YP4 633 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 SYNE4Q8N205 404 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 MBD3L2Q8NHZ7 208 aaPredicted RBP5.71□□□□□ -1.5
LIMA1-205ENST00000550592 STT3BQ8TCJ2 826 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 ABHD5Q8WTS1 349 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 ATRIPQ8WXE1 791 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 ZNF503Q96F45 646 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 C17orf80Q9BSJ5 609 aa5.71□□□□□ -1.5
LIMA1-205ENST00000550592 SORBS1Q9BX66 1292 aaKnown RBP5.71□□□□□ -1.5
LIMA1-205ENST00000550592 MAP3K4Q9Y6R4 1608 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 FER1L4A9Z1Z3 1794 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 COL15A1P39059 1388 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 EPRSP07814 1512 aaKnown RBP5.7□□□□□ -1.5
LIMA1-205ENST00000550592 ABCC2Q92887 1545 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 PIPSLA2A3N6 862 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 C1QTNF3-AMACRE9PGA6 284 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 TRIM38O00635 465 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 ASNA1O43681 348 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 SNX2O60749 519 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 VIPP01282 170 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 PDHA1P08559 390 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 HSPA1LP34931 641 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 TIRAPP58753 221 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 GPS1Q13098 491 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 PPFIA1Q13136 1202 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 FOXE3Q13461 319 aa5.7□□□□□ -1.5
LIMA1-205ENST00000550592 PRKG1Q13976 671 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms