RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 DEFB129Q9H1M3 183 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 TRIM49D1C9J1S8 452 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 NFIBO00712 420 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 CYLC2Q14093 348 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 ERAP2Q6P179 960 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 ZSWIM1Q9BR11 485 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 UBXN6Q9BZV1 441 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 F8W810 466 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 GUCA1AP43080 201 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 DPF2Q92785 391 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 SH3GL1Q99961 368 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 NAT9Q9BTE0 207 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 PRR23AA6NEV1 266 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 B3GAT3O94766 335 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 ITIH4Q14624 930 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 ZNF484Q5JVG2 852 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 ZNF438Q7Z4V0 828 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 COPS7BQ9H9Q2 264 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 ADGRA3Q8IWK6 1321 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 MAP3K13O43283 966 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 GEMP55040 296 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 BTKQ06187 659 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 ARHGAP17Q68EM7 881 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 CCDC81Q6ZN84 652 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 SERAC1Q96JX3 654 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 KPNA1P52294 538 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 CCDC103Q8IW40 242 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 KIF2BQ8N4N8 673 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 BBS2Q9BXC9 721 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 NCF1BA6NI72 391 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 NCF1CA8MVU1 366 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 LSM8O95777 96 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 NCF1P14598 390 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 OLFML2BQ68BL8 750 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 DENND1BQ6P3S1 775 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 EPS8L2Q9H6S3 715 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 KIAA1257Q9ULG3 409 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 SOX13Q9UN79 622 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 OR2W6PQ8NHA6 318 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 GLT1D1Q96MS3 346 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 ZIM3Q96PE6 472 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 THAP2Q9H0W7 228 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 EXOSC4Q9NPD3 245 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 UBQLN1Q9UMX0 589 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 RUVBL2Q9Y230 463 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 HOXA2O43364 376 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 ZC3H11AO75152 810 aaKnown RBP eCLIP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 FBXO21O94952 628 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 CYP11B1P15538 503 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 RCN1Q15293 331 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 CYP4Z1Q86W10 505 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 SLC20A1Q8WUM9 679 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 RSPH1Q8WYR4 309 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 FAM111AQ96PZ2 611 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 KLK14Q9P0G3 267 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 ERVK-10P10266 1014 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 CAPN10Q9HC96 672 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 MSH4O15457 936 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 CELF2O95319 508 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 VHLP40337 213 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 GNG14A0A1W2PPG7 69 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 NCAM2O15394 837 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 GLRA3O75311 464 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 FUT11Q495W5 492 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 CAMKK2Q96RR4 588 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 PPP1R3GB7ZBB8 358 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 FAM47E-STBD1D6RA91 191 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 XPO1O14980 1071 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 TFRCP02786 760 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 YY1P25490 414 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 PGS1Q32NB8 556 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 PRRG3Q9BZD7 231 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 TUBE1Q9UJT0 475 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 SATB2Q9UPW6 733 aa12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 DRG1Q9Y295 367 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-212ENST00000550536 TM9SF1O15321 606 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 SLC37A4O43826 429 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 KCNJ1P48048 391 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 GMPSP49915 693 aaPredicted RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 LAYNQ6UX15 382 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 APBB2Q92870 758 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 F9P00740 461 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 PHACTR4Q8IZ21 702 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 MMGT1Q8N4V1 131 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 UTP6Q9NYH9 597 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 LNPEPQ9UIQ6 1025 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 UBR1Q8IWV7 1749 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 CYB561D2O14569 222 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 RGS5O15539 181 aa12.9□□□□□ -0.34
RAB3IP-212ENST00000550536 KRT75O95678 551 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms