RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 OTOP3Q7RTS5 596 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 ZNF677Q86XU0 584 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 FMNL3Q8IVF7 1028 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 NPAS3Q8IXF0 933 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 SIX6OS1Q8N1H7 587 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 ST13P5Q8NFI4 369 aaPredicted RBP18.13■□□□□ 0.49
BRF1-217ENST00000550375 KCTD13Q8WZ19 329 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 NDRG1Q92597 394 aaKnown RBP18.13■□□□□ 0.49
BRF1-217ENST00000550375 MRPS31Q92665 395 aaKnown RBP18.13■□□□□ 0.49
BRF1-217ENST00000550375 ACSF2Q96CM8 615 aaPredicted RBP18.13■□□□□ 0.49
BRF1-217ENST00000550375 ULBP1Q9BZM6 244 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 LHX5Q9H2C1 402 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 TRPC7Q9HCX4 862 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.13■□□□□ 0.492e-7■■■■□ 25.7
BRF1-217ENST00000550375 AIPL1Q9NZN9 384 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 CDH7Q9ULB5 785 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 NR2E1Q9Y466 385 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 CEP83Q9Y592 693 aa18.13■□□□□ 0.49
BRF1-217ENST00000550375 C2CD4DB7Z1M9 353 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 TPM1P09493 284 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 FMO1Q01740 532 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 PDCLQ13371 301 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 TXNDC8Q6A555 127 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 TDRD5Q8NAT2 981 aaKnown RBP18.12■□□□□ 0.49
BRF1-217ENST00000550375 HSFY1Q96LI6 401 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 ZSWIM3Q96MP5 696 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 AGPAT1Q99943 283 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 MIS12Q9H081 205 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 NUCKS1Q9H1E3 243 aaKnown RBP18.12■□□□□ 0.49
BRF1-217ENST00000550375 HAUS4Q9H6D7 363 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 SCML2Q9UQR0 700 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 USP3Q9Y6I4 520 aa18.12■□□□□ 0.49
BRF1-217ENST00000550375 FAM92AA1XBS5 289 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 ZNF840PA6NDX5 716 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 ADCY5O95622 1261 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 ZBED1O96006 694 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 PGFP49763 221 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 KLHL30Q0D2K2 578 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 ADHFE1Q8IWW8 467 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 MAB21L3Q8N8X9 362 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 TMEM35BQ8NCS4 154 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 PDZD8Q8NEN9 1154 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 STK32AQ8WU08 396 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 CPA5Q8WXQ8 436 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 NOX5Q96PH1 765 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 PCDHB18PQ96TA0 734 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 SLC4A5Q9BY07 1137 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 USTQ9Y2C2 406 aa18.11■□□□□ 0.49
BRF1-217ENST00000550375 A0A1W2PQH9 124 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 GOLGA6L3A6NEY3 463 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 LAMP2P13473 410 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 TNFAIP3P21580 790 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 PPP3CCP48454 512 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 ADKP55263 362 aaKnown RBP18.1■□□□□ 0.49
BRF1-217ENST00000550375 ZP2Q05996 745 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 TBX2Q13207 712 aaPredicted RBP18.1■□□□□ 0.49
BRF1-217ENST00000550375 TJAP1Q5JTD0 557 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 NAA35Q5VZE5 725 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 CCDC186Q7Z3E2 898 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 SCUBE3Q8IX30 993 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 DRC7Q8IY82 874 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 CLEC4CQ8WTT0 213 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 OVCA2Q8WZ82 227 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 SYN2Q92777 582 aaPredicted RBP18.1■□□□□ 0.49
BRF1-217ENST00000550375 PPP1R13BQ96KQ4 1090 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 CPXM1Q96SM3 734 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 SLC46A2Q9BY10 475 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 TASP1Q9H6P5 420 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 SYNCQ9H7C4 482 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 TLR8Q9NR97 1041 aaKnown RBP18.1■□□□□ 0.49
BRF1-217ENST00000550375 TJP2Q9UDY2 1190 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 PRKAG3Q9UGI9 489 aa18.1■□□□□ 0.49
BRF1-217ENST00000550375 C2orf78A6NCI8 922 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 E5RJQ4 531 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 MFAP3LO75121 409 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 LSM8O95777 96 aaKnown RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 CDH5P33151 784 aaPredicted RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 PRKCIP41743 596 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 ACADSBP45954 432 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 RPL34P49207 117 aaKnown RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 NOMO3P69849 1222 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 TDRD12Q587J7 1177 aaKnown RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 ZNF571Q7Z3V5 609 aaPredicted RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 SCD5Q86SK9 330 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 MON1AQ86VX9 555 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 ZSCAN18Q8TBC5 510 aaPredicted RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 NECAB3Q96P71 396 aaPredicted RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 CYP2S1Q96SQ9 504 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 SMG9Q9H0W8 520 aaKnown RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 NMUR1Q9HB89 426 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 GDE1Q9NZC3 331 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 LIMD1Q9UGP4 676 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 NAGPAQ9UK23 515 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 NUP210Q8TEM1 1887 aaPredicted RBP18.09■□□□□ 0.49
BRF1-217ENST00000550375 MYO10Q9HD67 2058 aa18.09■□□□□ 0.49
BRF1-217ENST00000550375 LOC730098B7Z3J9 87 aa18.08■□□□□ 0.49
BRF1-217ENST00000550375 AKR1B15C9JRZ8 316 aaPredicted RBP18.08■□□□□ 0.49
BRF1-217ENST00000550375 ERBB2P04626 1255 aa18.08■□□□□ 0.49
BRF1-217ENST00000550375 CYP1A1P04798 512 aaPredicted RBP18.08■□□□□ 0.49
BRF1-217ENST00000550375 ZDHHC11BP0C7U3 371 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms