RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 SPATA17Q96L03 361 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 SLC22A12Q96S37 553 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 P2RY13Q9BPV8 354 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 SYT15Q9BQS2 421 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 PCIF1Q9H4Z3 704 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 ECT2Q9H8V3 914 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 TRPC7Q9HCX4 862 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 RXFP3Q9NSD7 469 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 KBTBD4Q9NVX7 518 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 GCNT4Q9P109 453 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 DNMT3LQ9UJW3 386 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 CDH9Q9ULB4 789 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 ARHGAP26Q9UNA1 814 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 MTMR6Q9Y217 621 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 PCDHGA5Q9Y5G8 931 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 WDFY3Q8IZQ1 3526 aa8.15□□□□□ -1.1
NEK3-201ENST00000550331 UBE4BO95155 1302 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 HCRTO43612 131 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 PPP6R2O75170 966 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 EPN2O95208 641 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 ZNF806P0C7X5 589 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 CCDC192P0DO97 292 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 WARSP23381 471 aaKnown RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 LMO2P25791 158 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 HOXC13P31276 330 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 PPP3CCP48454 512 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 IFNAR2P48551 515 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 PXNP49023 591 aaPredicted RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 GALK1P51570 392 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 SNRPFP62306 86 aaKnown RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 NOP14P78316 857 aaKnown RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 AMPD3Q01432 767 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 NR1H3Q13133 447 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 KCNB1Q14721 858 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 CCDC142Q17RM4 750 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 DUOXA2Q1HG44 320 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 EML3Q32P44 896 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 PSAPL1Q6NUJ1 521 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 CNNM4Q6P4Q7 775 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 KBTBD6Q86V97 674 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 CBWD2Q8IUF1 395 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 SCN4BQ8IWT1 228 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 PDILTQ8N807 584 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 OR5B17Q8NGF7 314 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 SH3RF2Q8TEC5 729 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 NOC3LQ8WTT2 800 aaKnown RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 CD101Q93033 1021 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 ACDQ96AP0 544 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 TTLL2Q9BWV7 592 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 LSM14BQ9BX40 385 aaKnown RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 PANK2Q9BZ23 570 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 TRIM9Q9C026 710 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 FBRSL1Q9HCM7 1045 aaKnown RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 CRTAC1Q9NQ79 661 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 DUS2Q9NX74 493 aaKnown RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 HSPBP1Q9NZL4 362 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 MAGEC2Q9UBF1 373 aaPredicted RBP8.14□□□□□ -1.11
NEK3-201ENST00000550331 EBF1Q9UH73 591 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 WNT6Q9Y6F9 365 aa8.14□□□□□ -1.11
NEK3-201ENST00000550331 NUP205Q92621 2012 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 LAMA1P25391 3075 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 KRTAP4-8A0A0G2JLE6 195 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 C2orf78A6NCI8 922 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 TRIM66O15016 1216 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 STX6O43752 255 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 ATP2C2O75185 946 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 TACC1O75410 805 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 NFATC1O95644 943 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 APBB3O95704 486 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 FAM163BP0C2L3 166 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 BMP2P12643 396 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 HDCP19113 662 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 BDNFP23560 247 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 VARSP26640 1264 aaKnown RBP8.13□□□□□ -1.11
NEK3-201ENST00000550331 ANXA13P27216 316 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 HOXD13P35453 343 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 GRIK1P39086 918 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 PSMC1P62191 440 aaKnown RBP8.13□□□□□ -1.11
NEK3-201ENST00000550331 CYP27A1Q02318 531 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 STK38Q15208 465 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 SNRNP35Q16560 246 aaKnown RBP8.13□□□□□ -1.11
NEK3-201ENST00000550331 LMBRD2Q68DH5 695 aaPredicted RBP8.13□□□□□ -1.11
NEK3-201ENST00000550331 RNF43Q68DV7 783 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 DENND5BQ6ZUT9 1274 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 EPM2AIP1Q7L775 607 aaPredicted RBP8.13□□□□□ -1.11
NEK3-201ENST00000550331 TRAPPC11Q7Z392 1133 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 ARL14EPQ8N8R7 260 aaPredicted RBP8.13□□□□□ -1.11
NEK3-201ENST00000550331 KDF1Q8NAX2 398 aaPredicted RBP8.13□□□□□ -1.11
NEK3-201ENST00000550331 LINC00301Q8NCQ3 95 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 GLIS3Q8NEA6 775 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 RPLP0P6Q8NHW5 317 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 MYCBPAPQ8TBZ2 947 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 ZNF507Q8TCN5 953 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 EZH1Q92800 747 aaPredicted RBP8.13□□□□□ -1.11
NEK3-201ENST00000550331 PCED1BQ96HM7 432 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 C8orf48Q96LL4 319 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 HHIPQ96QV1 700 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 FNBP1Q96RU3 617 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 CYP2S1Q96SQ9 504 aa8.13□□□□□ -1.11
NEK3-201ENST00000550331 ELOVL4Q9GZR5 314 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms