RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 C1orf210Q8IVY1 113 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 FAM114A1Q8IWE2 563 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 PPM1KQ8N3J5 372 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 CPA6Q8N4T0 437 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 SLC4A11Q8NBS3 891 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 EHBP1Q8NDI1 1231 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 SCAMP5Q8TAC9 235 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 SH3RF2Q8TEC5 729 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 WHAMMQ8TF30 809 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 ATP2A3Q93084 1043 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 JAKMIP2Q96AA8 810 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 CLDN23Q96B33 292 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 CNOT6LQ96LI5 555 aaKnown RBP6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 ARID3AQ99856 593 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 FAM83CQ9BQN1 747 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 DUSP16Q9BY84 665 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 EBF3Q9H4W6 596 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 LMAN1LQ9HAT1 526 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 TLR8Q9NR97 1041 aaKnown RBP6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 LMBRD1Q9NUN5 540 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 DUS2Q9NX74 493 aaKnown RBP6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 IL37Q9NZH6 218 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 DLGAP2Q9P1A6 1054 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 HESX1Q9UBX0 185 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 KIAA1257Q9ULG3 409 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 ARHGAP26Q9UNA1 814 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 MTF2Q9Y483 593 aaPredicted RBP6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 PCDHB4Q9Y5E5 795 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 PATJQ8NI35 1801 aa6.78□□□□□ -1.32
TMEM106C-213ENST00000550146 FAM92AA1XBS5 289 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 LEFTY2O00292 366 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 SLC9A3R1O14745 358 aaPredicted RBP6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 NFATC1O95644 943 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 OAS1P00973 400 aaKnown RBP6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 VDRP11473 427 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 TCF3P15923 654 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 ERCC5P28715 1186 aaPredicted RBP6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 CTHP32929 405 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 MTIF2P46199 727 aaKnown RBP6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 SOX9P48436 509 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 PSEN1P49768 467 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 TUBP50607 506 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 USP4Q13107 963 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 PPP2R5DQ14738 602 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 ZNF77Q15935 545 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 GOLGA7BQ2TAP0 167 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 DGKKQ5KSL6 1271 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 SNX30Q5VWJ9 437 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 ARHGAP17Q68EM7 881 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 TRIM68Q6AZZ1 485 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 TMEM270Q6UE05 265 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 RRAGAQ7L523 313 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 TADA2BQ86TJ2 420 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 ANKRD52Q8NB46 1076 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 ZMIZ2Q8NF64 920 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 OSCP1Q8WVF1 389 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 IER2Q9BTL4 223 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 UBXN6Q9BZV1 441 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 RNF38Q9H0F5 515 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 INTS2Q9H0H0 1204 aaKnown RBP6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 PNPLA8Q9NP80 782 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 FAM86C1Q9NVL1 165 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 SMPD4Q9NXE4 827 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 GMIPQ9P107 970 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 CFAP97Q9P2B7 532 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 SCML2Q9UQR0 700 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 CPQQ9Y646 472 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 WNT6Q9Y6F9 365 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 COL4A3Q01955 1670 aa6.77□□□□□ -1.33
TMEM106C-213ENST00000550146 SPAG17Q6Q759 2223 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 E2F8A0AVK6 867 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 HHLA1C9JL84 531 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 CYP26A1O43174 497 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 COCHO43405 550 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 TLR5O60602 858 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 OLFM2O95897 454 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 MBD3O95983 291 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 PAEPP09466 180 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 ZDHHC11BP0C7U3 371 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 RALAP11233 206 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 KRT5P13647 590 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 ARSAP15289 507 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 ATP5C1P36542 298 aaKnown RBP6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 KIF11P52732 1056 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 MFAP3P55082 362 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 GCNT1Q02742 428 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 CSTF1Q05048 431 aaKnown RBP6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 GOLGA8FQ08AF8 430 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 GOLGA8DPQ0D2H9 430 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 GRSF1Q12849 480 aaKnown RBP eCLIP6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 MTAPQ13126 283 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 PON2Q15165 354 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 STILQ15468 1287 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 EML3Q32P44 896 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 DPCR1Q3MIW9 517 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 C10orf120Q5SQS8 335 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 SASS6Q6UVJ0 657 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 GBP6Q6ZN66 633 aa6.76□□□□□ -1.33
TMEM106C-213ENST00000550146 ENOSF1Q7L5Y1 443 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms