RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 KLF8O95600 359 aaPredicted RBP16.54■□□□□ 0.24
TCHP-208ENST00000549550 CYP17A1P05093 508 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 PDE6CP51160 858 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 PNOCQ13519 176 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 ADGRF2Q8IZF7 708 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 IL17RCQ8NAC3 791 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 TXNDC5Q8NBS9 432 aaKnown RBP16.54■□□□□ 0.24
TCHP-208ENST00000549550 WHAMMQ8TF30 809 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 FUBP3Q96I24 572 aaKnown RBP eCLIP16.54■□□□□ 0.24
TCHP-208ENST00000549550 FAM84AQ96KN4 292 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 FAM213AQ9BRX8 229 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 MBD1Q9UIS9 605 aaPredicted RBP16.54■□□□□ 0.24
TCHP-208ENST00000549550 MSRB2Q9Y3D2 182 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 SNX9Q9Y5X1 595 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 PCDH15Q96QU1 1955 aa16.54■□□□□ 0.24
TCHP-208ENST00000549550 SMTNL1A8MU46 457 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 SGK1O00141 431 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 IKBKBO14920 756 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 PCSK1P29120 753 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 TIE1P35590 1138 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 MAGEA11P43364 429 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 LHX1P48742 406 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 TPM4P67936 248 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 SIM1P81133 766 aaPredicted RBP16.53■□□□□ 0.24
TCHP-208ENST00000549550 MESP2Q0VG99 397 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 MORC3Q14149 939 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 LMBRD2Q68DH5 695 aaPredicted RBP16.53■□□□□ 0.24
TCHP-208ENST00000549550 SV2BQ7L1I2 683 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 ZNF720Q7Z2F6 126 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 FILIP1Q7Z7B0 1213 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 BRSK2Q8IWQ3 736 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 CSGALNACT2Q8N6G5 542 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 LRRC52Q8N7C0 313 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 ZSWIM2Q8NEG5 633 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 CXorf38Q8TB03 319 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 SPATA18Q8TC71 538 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 LARP4BQ92615 738 aaKnown RBP16.53■□□□□ 0.24
TCHP-208ENST00000549550 C7orf25Q9BPX7 421 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 PANK2Q9BZ23 570 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 GDAP2Q9NXN4 497 aa16.53■□□□□ 0.24
TCHP-208ENST00000549550 BCCIPQ9P287 314 aaKnown RBP eCLIP16.53■□□□□ 0.24
TCHP-208ENST00000549550 PVALEFA0A1B0GWK0 134 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 MYMKA6NI61 221 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 GABRDO14764 452 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 SCAMP3O14828 347 aaKnown RBP16.52■□□□□ 0.24
TCHP-208ENST00000549550 ATP2C2O75185 946 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 PPP1R37O75864 691 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 CFIP05156 583 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 KRT19P08727 400 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 CHRM1P11229 460 aaPredicted RBP16.52■□□□□ 0.24
TCHP-208ENST00000549550 SLC6A11P48066 632 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 USP46P62068 366 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 KCNA1Q09470 495 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 SEMA3BQ13214 749 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 LYSMD4Q5XG99 296 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 FAM171BQ6P995 826 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 SLC23A3Q6PIS1 610 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 PIP4P1Q86T03 277 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 SFR1Q86XK3 245 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 ADGRG2Q8IZP9 1017 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 TOP6BLQ8N6T0 577 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 CACTINQ8WUQ7 758 aaKnown RBP16.52■□□□□ 0.24
TCHP-208ENST00000549550 HMGB4Q8WW32 186 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 HVCN1Q96D96 273 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 SAAL1Q96ER3 474 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 SPATA17Q96L03 361 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 PNKPQ96T60 521 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 POLMQ9NP87 494 aaPredicted RBP16.52■□□□□ 0.24
TCHP-208ENST00000549550 ZDHHC4Q9NPG8 344 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 FSCN3Q9NQT6 498 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 TRPM5Q9NZQ8 1165 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 PILRBQ9UKJ0 227 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 ITGA11Q9UKX5 1188 aa16.52■□□□□ 0.24
TCHP-208ENST00000549550 GCN1Q92616 2671 aaKnown RBP16.51■□□□□ 0.23
TCHP-208ENST00000549550 BECN2A8MW95 431 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 KAT7O95251 611 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 APODP05090 189 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 PFKLP17858 780 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 ITPKAP23677 461 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 ERCC5P28715 1186 aaPredicted RBP16.51■□□□□ 0.23
TCHP-208ENST00000549550 PSMC1P62191 440 aaKnown RBP16.51■□□□□ 0.23
TCHP-208ENST00000549550 DHCR24Q15392 516 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 SOWAHAQ2M3V2 549 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 MAP7D1Q3KQU3 841 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 HSF5Q4G112 596 aaPredicted RBP16.51■□□□□ 0.23
TCHP-208ENST00000549550 EOGTQ5NDL2 527 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 EMC10Q5UCC4 262 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 C12orf40Q86WS4 652 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 MYLPFQ96A32 169 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 RNF38Q9H0F5 515 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 CBX8Q9HC52 389 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 RBAKQ9NYW8 714 aaPredicted RBP16.51■□□□□ 0.23
TCHP-208ENST00000549550 MAGEC2Q9UBF1 373 aaPredicted RBP16.51■□□□□ 0.23
TCHP-208ENST00000549550 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
TCHP-208ENST00000549550 IGSF10Q6WRI0 2623 aa16.5■□□□□ 0.23
TCHP-208ENST00000549550 TCRBV21S2A2A0A5A6 115 aa16.5■□□□□ 0.23
TCHP-208ENST00000549550 UPK3BL1B0FP48 263 aa16.5■□□□□ 0.23
TCHP-208ENST00000549550 UPK3BL2E5RIL1 263 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms