RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 YWHAEP62258 255 aaKnown RBP14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 ROR1Q01973 937 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 CNTN2Q02246 1040 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 SLC34A1Q06495 639 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 RNF220Q5VTB9 566 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 PHC3Q8NDX5 983 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 STMN2Q93045 179 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 FAF2Q96CS3 445 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 CLPTM1LQ96KA5 538 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 PHACTR1Q9C0D0 580 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 IQCGQ9H095 443 aaKnown RBP14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 KCNG1Q9UIX4 513 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 USP18Q9UMW8 372 aa14.74□□□□□ -0.05
RAPGEF3-218ENST00000548919 B2RBV5 119 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 SP100P23497 879 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 CMPK2Q5EBM0 449 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 PRAMEF18Q5VWM3 479 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 FAM161BQ96MY7 647 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 TWNKQ96RR1 684 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 PCYT2Q99447 389 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 ASCC2Q9H1I8 757 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 RAB6BQ9NRW1 208 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 MGAMO43451 1857 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 H7C0C1 242 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 SMIM24O75264 130 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 TOM1L1O75674 476 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 TGDSO95455 350 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 HOXC6P09630 235 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 ATP5OP48047 213 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 BACE1P56817 501 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 KDSRQ06136 332 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 KCNJ11Q14654 390 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 ARID3BQ8IVW6 561 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 KBTBD2Q8IY47 623 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 CMASQ8NFW8 434 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 TMEM134Q9H6X4 195 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 TRUB2O95900 331 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 TOP3BO95985 862 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 CDH6P55285 790 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 MRPS5P82675 430 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 BST1Q10588 318 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 KRT72Q14CN4 511 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 CDO1Q16878 200 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 NBPF20Q3BBV1 942 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 NBPF12Q5TAG4 269 aaPredicted RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 LRRC71Q8N4P6 559 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 AGBL3Q8NEM8 1001 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 ACAP3Q96P50 834 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 TUBB6Q9BUF5 446 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 PPP1R12CQ9BZL4 782 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 SPATS2LQ9NUQ6 558 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 PPARGC1AQ9UBK2 798 aaKnown RBP14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 TTLL3Q9Y4R7 772 aa14.73□□□□□ -0.05
RAPGEF3-218ENST00000548919 GRAP2O75791 330 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 GJB1P08034 283 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 YWHAZP63104 245 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 TMPRSS15P98073 1019 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 C15orf59Q2T9L4 293 aaPredicted RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 TMEM192Q8IY95 271 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 TTLL6Q8N841 843 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 ACO2Q99798 780 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 FRMD8P1Q9BZ68 369 aaPredicted RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 C20orf27Q9GZN8 174 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 SDCBP2Q9H190 292 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 SMYD2Q9NRG4 433 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 RNF8O76064 485 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 C1QAP02745 245 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 CHI3L2Q15782 390 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 SLC26A11Q86WA9 606 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 NIM1KQ8IY84 436 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 RTKN2Q8IZC4 609 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 RNF149Q8NC42 400 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 RBM15BQ8NDT2 890 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 UBA3Q8TBC4 463 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 PIWIL1Q96J94 861 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 MRPL4Q9BYD3 311 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 NIFKQ9BYG3 293 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 SMYD3Q9H7B4 428 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 PLAC1Q9HBJ0 212 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 CPSF3Q9UKF6 684 aaKnown RBP14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 LRCH1Q9Y2L9 728 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 HEY1Q9Y5J3 304 aa14.72□□□□□ -0.05
RAPGEF3-218ENST00000548919 RLFQ13129 1914 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 OGTO15294 1046 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 KCNN4O15554 427 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 AP3M2P53677 418 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 SATB1Q01826 763 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 FAM102AQ5T9C2 384 aaPredicted RBP14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 TTC39BQ5VTQ0 682 aaPredicted RBP14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 TRNP1Q6NT89 227 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 ZPBP2Q6X784 338 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 ZCCHC23Q6ZST2 131 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 SHKBP1Q8TBC3 707 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 FNIP1Q8TF40 1166 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 TEKT4Q8WW24 435 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 TSC22D3Q99576 134 aa14.71□□□□□ -0.05
RAPGEF3-218ENST00000548919 ACAD9Q9H845 621 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms