RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 B3GNT5Q9BYG0 378 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 AGPAT3Q9NRZ7 376 aa17.52■□□□□ 0.4
SSH1-208ENST00000548522 BCCIPQ9P287 314 aaKnown RBP eCLIP17.52■□□□□ 0.4
SSH1-208ENST00000548522 THADAQ6YHU6 1953 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 KIAA0391O15091 583 aaKnown RBP17.51■□□□□ 0.39
SSH1-208ENST00000548522 TRIM24O15164 1050 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 COCHO43405 550 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 TACC1O75410 805 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 ALDH1A2O94788 518 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 ADH1CP00326 375 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 APODP05090 189 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 CEACAM1P13688 526 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 CYP2J2P51589 502 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 SURF1Q15526 300 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 E2F4Q16254 413 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 WDR72Q3MJ13 1102 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 TDRD10Q5VZ19 366 aaKnown RBP17.51■□□□□ 0.39
SSH1-208ENST00000548522 LPCAT2Q7L5N7 544 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 EPM2AIP1Q7L775 607 aaPredicted RBP17.51■□□□□ 0.39
SSH1-208ENST00000548522 NAT16Q8N8M0 369 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 B3GALNT2Q8NCR0 500 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 SCAMP5Q8TAC9 235 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 ZNF516Q92618 1163 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 GATA6Q92908 595 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 ERLEC1Q96DZ1 483 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 KCNK16Q96T55 309 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 CGRRF1Q99675 332 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 SCNM1Q9BWG6 230 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 TRIM9Q9C026 710 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 ELOVL4Q9GZR5 314 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 SMYD3Q9H7B4 428 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 EVLQ9UI08 416 aaPredicted RBP17.51■□□□□ 0.39
SSH1-208ENST00000548522 HCN2Q9UL51 889 aa17.51■□□□□ 0.39
SSH1-208ENST00000548522 K7ELQ4 463 aaPredicted RBP17.5■□□□□ 0.39
SSH1-208ENST00000548522 SLC9A3R1O14745 358 aaPredicted RBP17.5■□□□□ 0.39
SSH1-208ENST00000548522 CLIC2O15247 247 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 HOXB3P14651 431 aaPredicted RBP17.5■□□□□ 0.39
SSH1-208ENST00000548522 ENGP17813 658 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 TNNI1P19237 187 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 ITPKAP23677 461 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 EIF2DP41214 584 aaKnown RBP17.5■□□□□ 0.39
SSH1-208ENST00000548522 GRIA2P42262 883 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 PGFP49763 221 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 MYL6P60660 151 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 TNNC1P63316 161 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 CYP24A1Q07973 514 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 SLC39A14Q15043 492 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 MIB1Q86YT6 1006 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 NELFCDQ8IXH7 590 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 ETFBKMTQ8IXQ9 262 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 DEFB119Q8N690 84 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 KDF1Q8NAX2 398 aaPredicted RBP17.5■□□□□ 0.39
SSH1-208ENST00000548522 FBXO32Q969P5 355 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 SPACA7Q96KW9 195 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 SLITRK1Q96PX8 696 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 XYLT2Q9H1B5 865 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 CCSER2Q9H7U1 834 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 EHD2Q9NZN4 543 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 NXF1Q9UBU9 619 aaKnown RBP17.5■□□□□ 0.39
SSH1-208ENST00000548522 MTMR6Q9Y217 621 aa17.5■□□□□ 0.39
SSH1-208ENST00000548522 DSPP15924 2871 aaKnown RBP17.5■□□□□ 0.39
SSH1-208ENST00000548522 ASCC3Q8N3C0 2202 aaKnown RBP17.49■□□□□ 0.39
SSH1-208ENST00000548522 TNRC6BQ9UPQ9 1833 aaKnown RBP17.49■□□□□ 0.39
SSH1-208ENST00000548522 A8MXQ7 604 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 TNFRSF10BO14763 440 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 MAP3K13O43283 966 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 PDCP20941 246 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 YWHAQP27348 245 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 CASP1P29466 404 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 PPP3CCP48454 512 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 CASP4P49662 377 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 ASIC1P78348 528 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 PSMD6Q15008 389 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 EOGTQ5NDL2 527 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 LYSMD4Q5XG99 296 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 SYT12Q8IV01 421 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 BBS7Q8IWZ6 715 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 NUP93Q8N1F7 819 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 KIAA1958Q8N8K9 716 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 PLEKHO2Q8TD55 490 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 TNMDQ9H2S6 317 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 POLMQ9NP87 494 aaPredicted RBP17.49■□□□□ 0.39
SSH1-208ENST00000548522 KBTBD4Q9NVX7 518 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 CHMP5Q9NZZ3 219 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 CHORDC1Q9UHD1 332 aaPredicted RBP17.49■□□□□ 0.39
SSH1-208ENST00000548522 CELSR3Q9NYQ7 3312 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 BAHCC1Q9P281 2608 aa17.49■□□□□ 0.39
SSH1-208ENST00000548522 GON4LQ3T8J9 2241 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 A0A0A0MRY4 1105 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 SPAARA0A1B0GVQ0 90 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 EIF3DO15371 548 aaKnown RBP eCLIP17.48■□□□□ 0.39
SSH1-208ENST00000548522 HYAL3O43820 417 aaPredicted RBP17.48■□□□□ 0.39
SSH1-208ENST00000548522 TULP3O75386 442 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 IRF1P10914 325 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 WASP42768 502 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 SLC5A3P53794 718 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 CDH8P55286 799 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 FAM26FQ5R3K3 315 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
SSH1-208ENST00000548522 PAQR9Q6ZVX9 377 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms