RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 ZMIZ2Q8NF64 920 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 TMEM169Q96HH4 297 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.33
RAB5B-204ENST00000548068 TMEM209Q96SK2 561 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 TBCBQ99426 244 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.33
RAB5B-204ENST00000548068 ULBP1Q9BZM6 244 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 SLITRK6Q9H5Y7 841 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 POPDC2Q9HBU9 364 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 RBM12Q9NTZ6 932 aaKnown RBP12.96□□□□□ -0.33
RAB5B-204ENST00000548068 TMLHEQ9NVH6 421 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 ABI2Q9NYB9 513 aaPredicted RBP12.96□□□□□ -0.33
RAB5B-204ENST00000548068 SMARCAL1Q9NZC9 954 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 SPG21Q9NZD8 308 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 HCSTQ9UBK5 93 aa12.96□□□□□ -0.33
RAB5B-204ENST00000548068 MYO16Q9Y6X6 1858 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 NT5C1B-RDH14C9J2C7 533 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 HHLA1C9JL84 531 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 FSCN2O14926 492 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 EFEMP2O95967 443 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 NOS2P35228 1153 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 GRIK1P39086 918 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 SLC25A11Q02978 314 aaKnown RBP12.95□□□□□ -0.34
RAB5B-204ENST00000548068 CREMQ03060 361 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 ADCY1Q08828 1119 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 GPR17Q13304 367 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 CCDC14Q49A88 953 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 FAM117BQ6P1L5 589 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 STRADAQ7RTN6 431 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 OTOP2Q7RTS6 562 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 SLC39A11Q8N1S5 342 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 COLGALT1Q8NBJ5 622 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 CCDC26Q8TAB7 109 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 CLEC4CQ8WTT0 213 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 FAM172AQ8WUF8 416 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 TEKT4Q8WW24 435 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 BADQ92934 168 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 C8orf48Q96LL4 319 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 CFAP57Q96MR6 1250 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 SLC2A13Q96QE2 648 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 KCNK16Q96T55 309 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 SLC9A7Q96T83 725 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 HERC2P3Q9BVR0 1158 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 NGRNQ9NPE2 291 aaKnown RBP12.95□□□□□ -0.34
RAB5B-204ENST00000548068 HOMER3Q9NSC5 361 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 TMEM51Q9NW97 253 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAB5B-204ENST00000548068 MTRRQ9UBK8 725 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 USP18Q9UMW8 372 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 BRCA2P51587 3418 aa12.95□□□□□ -0.34
RAB5B-204ENST00000548068 PLXNA3P51805 1871 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 CAPN9O14815 690 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 TBC1D4O60343 1298 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 PHF2O75151 1096 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 TRUB2O95900 331 aaKnown RBP12.94□□□□□ -0.34
RAB5B-204ENST00000548068 LTFP02788 710 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 SOD2P04179 222 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 RHOXF2BP0C7M4 288 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 MIPP30301 263 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 PBX3P40426 434 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 GLUD2P49448 558 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 CACNA2D1P54289 1103 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 TAF5Q15542 800 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 PSMD5Q16401 504 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 CDO1Q16878 200 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 SLC25A52Q3SY17 297 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 BOLA3Q53S33 107 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 RTP2Q5QGT7 225 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 DAB2IPQ5VWQ8 1189 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 PM20D1Q6GTS8 502 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 ZNF365Q70YC5 407 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 BEND5Q7L4P6 421 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 MAATS1Q7Z4T9 603 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 VSIG1Q86XK7 387 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 MAP7D3Q8IWC1 876 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 SCN4BQ8IWT1 228 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 GPR65Q8IYL9 337 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 RNF168Q8IYW5 571 aaPredicted RBP12.94□□□□□ -0.34
RAB5B-204ENST00000548068 BCL7CQ8WUZ0 217 aaPredicted RBP12.94□□□□□ -0.34
RAB5B-204ENST00000548068 CENPIQ92674 756 aaPredicted RBP12.94□□□□□ -0.34
RAB5B-204ENST00000548068 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB5B-204ENST00000548068 CEP295NLQ96MC4 621 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 SLITRK1Q96PX8 696 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 RHOXF2Q9BQY4 288 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 RHOBTB2Q9BYZ6 727 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 OSBPL8Q9BZF1 889 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 FBXO44Q9H4M3 255 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 ZWILCHQ9H900 591 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 COMMD8Q9NX08 183 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 EFR3BQ9Y2G0 817 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
RAB5B-204ENST00000548068 MRPL42Q9Y6G3 142 aaKnown RBP12.94□□□□□ -0.34
RAB5B-204ENST00000548068 LRRD1A4D1F6 860 aa12.93□□□□□ -0.34
RAB5B-204ENST00000548068 ERLIN1O75477 346 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms