RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ABCF2Q9UG63 623 aa5.06□□□□□ -1.6
CBX5-203ENST00000547872 IP6K2Q9UHH9 426 aa5.06□□□□□ -1.6
CBX5-203ENST00000547872 SERPINB13Q9UIV8 391 aa5.06□□□□□ -1.6
CBX5-203ENST00000547872 IPPQ9Y573 584 aa5.06□□□□□ -1.6
CBX5-203ENST00000547872 LAMA2P24043 3122 aaKnown RBP5.06□□□□□ -1.6
CBX5-203ENST00000547872 MYH2Q9UKX2 1941 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 E2F8A0AVK6 867 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 TRIM24O15164 1050 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 SGTAO43765 313 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 SCAF4O95104 1147 aaKnown RBP5.05□□□□□ -1.6
CBX5-203ENST00000547872 CSPG5O95196 566 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 ZRANB2O95218 330 aaKnown RBP eCLIP5.05□□□□□ -1.6
CBX5-203ENST00000547872 POMCP01189 267 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 AMY1AP04745 511 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 CYBAP13498 195 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 TNFRSF1AP19438 455 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 PCSK1P29120 753 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 APOBEC3AP31941 199 aaPredicted RBP5.05□□□□□ -1.6
CBX5-203ENST00000547872 NHLH2Q02577 135 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 MTM1Q13496 603 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 IL10RAQ13651 578 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 TOB2Q14106 344 aaPredicted RBP5.05□□□□□ -1.6
CBX5-203ENST00000547872 PLS1Q14651 629 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 LRRC41Q15345 812 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 LSM12Q3MHD2 195 aaKnown RBP5.05□□□□□ -1.6
CBX5-203ENST00000547872 C3orf36Q3SXR2 165 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 MIIPQ5JXC2 388 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 ODR4Q5SWX8 454 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 FKBP1CQ5VVH2 108 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 ZNF365Q70YC5 407 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 ARNTL2Q8WYA1 636 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 KAT5Q92993 513 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 SUCLG2Q96I99 432 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 DCLRE1CQ96SD1 692 aaKnown RBP5.05□□□□□ -1.6
CBX5-203ENST00000547872 AS3MTQ9HBK9 375 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 XPNPEP3Q9NQH7 507 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 C9orf78Q9NZ63 289 aaPredicted RBP5.05□□□□□ -1.6
CBX5-203ENST00000547872 CEP72Q9P209 647 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 MORF4L1Q9UBU8 362 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 MTUS1Q9ULD2 1270 aa5.05□□□□□ -1.6
CBX5-203ENST00000547872 CFAP20Q9Y6A4 193 aaKnown RBP5.05□□□□□ -1.6
CBX5-203ENST00000547872 UTYO14607 1347 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 MROH5Q6ZUA9 1318 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 EPOPA6NHQ4 379 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 S100BP04271 92 aaPredicted RBP5.04□□□□□ -1.6
CBX5-203ENST00000547872 SPATA31D3P0C874 917 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 PF4V1P10720 104 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 ALAS1P13196 640 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 IL9P15248 144 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 EDNRBP24530 442 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 EPHB1P54762 984 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 CCL23P55773 120 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 DGCR2P98153 550 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 MCL1Q07820 350 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 TARDBPQ13148 414 aaKnown RBP eCLIP5.04□□□□□ -1.6
CBX5-203ENST00000547872 PPIGQ13427 754 aaKnown RBP eCLIP5.04□□□□□ -1.6
CBX5-203ENST00000547872 PIN1Q13526 163 aaPredicted RBP5.04□□□□□ -1.6
CBX5-203ENST00000547872 TUBA3CQ13748 450 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 RAB39AQ14964 217 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 RAB30Q15771 203 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 TWISTNBQ3B726 338 aaPredicted RBP5.04□□□□□ -1.6
CBX5-203ENST00000547872 PLEKHG6Q3KR16 790 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 ZNF529Q6P280 563 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 TUBA3EQ6PEY2 450 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 SPATA31D4Q6ZUB0 917 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 SEM1Q6ZVN7 128 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 ZGPATQ8N5A5 531 aaKnown RBP5.04□□□□□ -1.6
CBX5-203ENST00000547872 CACTINQ8WUQ7 758 aaKnown RBP5.04□□□□□ -1.6
CBX5-203ENST00000547872 RUNDC1Q96C34 613 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 ZNF503Q96F45 646 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 CLPTM1LQ96KA5 538 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 ZNF747Q9BV97 191 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 REXO4Q9GZR2 422 aaKnown RBP5.04□□□□□ -1.6
CBX5-203ENST00000547872 SIL1Q9H173 461 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 STARD7Q9NQZ5 370 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 TRPM5Q9NZQ8 1165 aa5.04□□□□□ -1.6
CBX5-203ENST00000547872 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.04□□□□□ -1.6
CBX5-203ENST00000547872 REXO2Q9Y3B8 237 aaKnown RBP5.04□□□□□ -1.6
CBX5-203ENST00000547872 UMODL1Q5DID0 1318 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 DIRC3C9JPN6 131 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 LEFTY2O00292 366 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 ERC2O15083 957 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 KIAA0391O15091 583 aaKnown RBP5.03□□□□□ -1.6
CBX5-203ENST00000547872 SEPT4O43236 478 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 CNMDO75829 334 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 CA3P07451 260 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 IFIT1P09914 478 aaKnown RBP5.03□□□□□ -1.6
CBX5-203ENST00000547872 RARBP10826 455 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 SLC5A1P13866 664 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 TACR2P21452 398 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 ADORA2AP29274 412 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 CYP2C18P33260 490 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 CHN2P52757 468 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 RNASE9P60153 205 aaKnown RBP5.03□□□□□ -1.6
CBX5-203ENST00000547872 CTXN1P60606 82 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 GNAI1P63096 354 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 CCNA1P78396 465 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 CSRP2Q16527 193 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 GDF7Q7Z4P5 450 aa5.03□□□□□ -1.6
CBX5-203ENST00000547872 TTC7BQ86TV6 843 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms