RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 TARSP26639 723 aaKnown RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 BCAT1P54687 386 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 SLC8A3P57103 927 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 APBA1Q02410 837 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 KCNJ12Q14500 433 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 EXOC3L4Q17RC7 722 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 CT47A1Q5JQC4 288 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 CAVIN1Q6NZI2 390 aaKnown RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 GJB7Q6PEY0 223 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 ZNF852Q6ZMS4 543 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 PIGZQ86VD9 579 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 CCDC105Q8IYK2 499 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 TUBGCP2Q9BSJ2 902 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 NACA2Q9H009 215 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 EBF3Q9H4W6 596 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 UBE2TQ9NPD8 197 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 GKN1Q9NS71 199 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 HESX1Q9UBX0 185 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 CHORDC1Q9UHD1 332 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 NDRG2Q9UN36 371 aaKnown RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 MTF2Q9Y483 593 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-204ENST00000547517 CPQQ9Y646 472 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 WNT6Q9Y6F9 365 aa12.48□□□□□ -0.41
RAB5C-204ENST00000547517 GTPBP10A4D1E9 387 aaKnown RBP12.47□□□□□ -0.41
RAB5C-204ENST00000547517 SHISA7A6NL88 538 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 FAM170BA6NMN3 283 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 RNF225M0QZC1 329 aaPredicted RBP12.47□□□□□ -0.41
RAB5C-204ENST00000547517 LEFTY2O00292 366 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 O00370 1275 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 MAN2B1O00754 1011 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
RAB5C-204ENST00000547517 CALCAP01258 141 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 PAEPP09466 180 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 ZDHHC11BP0C7U3 371 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 ARSAP15289 507 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 SLC9A1P19634 815 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 CTHP32929 405 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 IFNAR2P48551 515 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 PGFP49763 221 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 TUBP50607 506 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 KIF11P52732 1056 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 SLC7A9P82251 487 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 PDE4CQ08493 712 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 BST2Q10589 180 aaKnown RBP12.47□□□□□ -0.41
RAB5C-204ENST00000547517 ITPRIPL2Q3MIP1 535 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 VWA3BQ502W6 1294 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 TCP11X2Q5H9J9 407 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 MIIPQ5JXC2 388 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 HECTD3Q5T447 861 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 ANKRD52Q8NB46 1076 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 UBA3Q8TBC4 463 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 ENOX1Q8TC92 643 aaKnown RBP12.47□□□□□ -0.41
RAB5C-204ENST00000547517 TFAP2BQ92481 460 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 FAM3CQ92520 227 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 RNF38Q9H0F5 515 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 KCNH6Q9H252 994 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 NDST4Q9H3R1 872 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 HPS4Q9NQG7 708 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
RAB5C-204ENST00000547517 DUS2Q9NX74 493 aaKnown RBP12.47□□□□□ -0.41
RAB5C-204ENST00000547517 TAB2Q9NYJ8 693 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 APEX2Q9UBZ4 518 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 SCML2Q9UQR0 700 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 MRPS17Q9Y2R5 130 aaKnown RBP12.47□□□□□ -0.41
RAB5C-204ENST00000547517 CACNA1AO00555 2505 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
RAB5C-204ENST00000547517 A0A1W2PQH9 124 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 SPECC1L-ADORA2AF8WAN1 911 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 M0QYV0 167 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 TULP2O00295 520 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 XPO1O14980 1071 aaKnown RBP12.46□□□□□ -0.41
RAB5C-204ENST00000547517 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-204ENST00000547517 TLR5O60602 858 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 GLULP15104 373 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 TCF3P15923 654 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 EEF1GP26641 437 aaKnown RBP12.46□□□□□ -0.41
RAB5C-204ENST00000547517 PON1P27169 355 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 ZNF132P52740 706 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 MFAP3P55082 362 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 ZXDBP98169 803 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 TYRO3Q06418 890 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 PDGFRLQ15198 375 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 SNX30Q5VWJ9 437 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 DTWD2Q8NBA8 298 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 OSCP1Q8WVF1 389 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 MSANTD3Q96H12 275 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 PRRX2Q99811 253 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 FAM83CQ9BQN1 747 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 C8orf33Q9H7E9 229 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-204ENST00000547517 NMUR1Q9HB89 426 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 OSER1Q9NX31 292 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 CFAP97Q9P2B7 532 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 NAGPAQ9UK23 515 aa12.46□□□□□ -0.41
RAB5C-204ENST00000547517 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-204ENST00000547517 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.46□□□□□ -0.41
RAB5C-204ENST00000547517 OTOL1A6NHN0 477 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-204ENST00000547517 SETSIPP0DME0 302 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms