RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 KLHDC10Q6PID8 442 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 TMEM270Q6UE05 265 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 RRAGAQ7L523 313 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 ARL14EPQ8N8R7 260 aaPredicted RBP11.55□□□□□ -0.56
GCN1-202ENST00000547263 RBBP8NLQ8NC74 664 aaPredicted RBP11.55□□□□□ -0.56
GCN1-202ENST00000547263 SLC35F5Q8WV83 523 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 KCTD13Q8WZ19 329 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 CHFRQ96EP1 664 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 MSANTD3Q96H12 275 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 HEXIM2Q96MH2 286 aaKnown RBP11.55□□□□□ -0.56
GCN1-202ENST00000547263 MED10Q9BTT4 135 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 NAA15Q9BXJ9 866 aaKnown RBP11.55□□□□□ -0.56
GCN1-202ENST00000547263 SLITRK6Q9H5Y7 841 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 LIMA1Q9UHB6 759 aaKnown RBP11.55□□□□□ -0.56
GCN1-202ENST00000547263 TSPAN16Q9UKR8 245 aa11.55□□□□□ -0.56
GCN1-202ENST00000547263 SETSIPP0DME0 302 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 HDCP19113 662 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 PTMSP20962 102 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 AVPR2P30518 371 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 GDI1P31150 447 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 AVPR1AP37288 418 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 VCPP55072 806 aaKnown RBP11.54□□□□□ -0.56
GCN1-202ENST00000547263 PDE4CQ08493 712 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 BST2Q10589 180 aaKnown RBP11.54□□□□□ -0.56
GCN1-202ENST00000547263 TPD52L1Q16890 204 aaPredicted RBP11.54□□□□□ -0.56
GCN1-202ENST00000547263 ASTLQ6HA08 431 aaPredicted RBP11.54□□□□□ -0.56
GCN1-202ENST00000547263 CAVIN1Q6NZI2 390 aaKnown RBP11.54□□□□□ -0.56
GCN1-202ENST00000547263 SCD5Q86SK9 330 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 PIGZQ86VD9 579 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 SIX5Q8N196 739 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 TMEM105Q8N8V8 129 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 FBXO32Q969P5 355 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 CYP2S1Q96SQ9 504 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 CRACR2AQ9BSW2 395 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
GCN1-202ENST00000547263 UBE2TQ9NPD8 197 aaPredicted RBP11.54□□□□□ -0.56
GCN1-202ENST00000547263 PLCB1Q9NQ66 1216 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 HPS4Q9NQG7 708 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 FANCLQ9NW38 375 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 OSER1Q9NX31 292 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 CLIC5Q9NZA1 410 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 GMIPQ9P107 970 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 AJAP1Q9UKB5 411 aaPredicted RBP11.54□□□□□ -0.56
GCN1-202ENST00000547263 F5P12259 2224 aa11.54□□□□□ -0.56
GCN1-202ENST00000547263 TULP2O00295 520 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 ZNF263O14978 683 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 COCHO43405 550 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 GREM1O60565 184 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 CLSTN1O94985 981 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 RFX1P22670 979 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 PSEN1P49768 467 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 MFAP3P55082 362 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 APBA1Q02410 837 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 MTF1Q14872 753 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 IQCB1Q15051 598 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 GOLGA7BQ2TAP0 167 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 GJB7Q6PEY0 223 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 C1orf228Q6PIY5 440 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 DHX40Q8IX18 779 aaKnown RBP11.53□□□□□ -0.56
GCN1-202ENST00000547263 PJA1Q8NG27 643 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 CLDN23Q96B33 292 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 SHDQ96IW2 340 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 GANQ9H2C0 597 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 BRD9Q9H8M2 597 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 TBC1D17Q9HA65 648 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 NMUR1Q9HB89 426 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 HEBP1Q9NRV9 189 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
GCN1-202ENST00000547263 CHORDC1Q9UHD1 332 aaPredicted RBP11.53□□□□□ -0.56
GCN1-202ENST00000547263 FBXL21Q9UKT6 434 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 CA14Q9ULX7 337 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 SIK3Q9Y2K2 1263 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 DAAM1Q9Y4D1 1078 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 PCDHB4Q9Y5E5 795 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 KIAA1549LQ6ZVL6 1849 aa11.53□□□□□ -0.56
GCN1-202ENST00000547263 KANSL1LA0AUZ9 987 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 OTOL1A6NHN0 477 aaPredicted RBP11.52□□□□□ -0.57
GCN1-202ENST00000547263 PI15O43692 258 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 LETM1O95202 739 aaPredicted RBP11.52□□□□□ -0.57
GCN1-202ENST00000547263 CKMP06732 381 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 GPD2P43304 727 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 PDGFRLQ15198 375 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 GAB4Q2WGN9 574 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 HECTD3Q5T447 861 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 KLHDC7AQ5VTJ3 777 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 CCDC105Q8IYK2 499 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 FAM71AQ8IYT1 594 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 SH3RF2Q8TEC5 729 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 STK32AQ8WU08 396 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 OSCP1Q8WVF1 389 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 ZNF606Q8WXB4 792 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 HSFY1Q96LI6 401 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 ERGIC2Q96RQ1 377 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 NELL2Q99435 816 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 C8orf33Q9H7E9 229 aaPredicted RBP11.52□□□□□ -0.57
GCN1-202ENST00000547263 LTB4R2Q9NPC1 389 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 TLR8Q9NR97 1041 aaKnown RBP11.52□□□□□ -0.57
GCN1-202ENST00000547263 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
GCN1-202ENST00000547263 LGALS16A8MUM7 142 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms