RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF564Q8TBZ8 553 aaPredicted RBP16.64■□□□□ 0.25
TRAFD1-203ENST00000547063 GDPD5Q8WTR4 605 aa16.64■□□□□ 0.25
TRAFD1-203ENST00000547063 ARHGEF26Q96DR7 871 aa16.64■□□□□ 0.25
TRAFD1-203ENST00000547063 MRPL38Q96DV4 380 aaKnown RBP16.64■□□□□ 0.25
TRAFD1-203ENST00000547063 YIPF1Q9Y548 306 aa16.64■□□□□ 0.25
TRAFD1-203ENST00000547063 ASB3Q9Y575 518 aa16.64■□□□□ 0.25
TRAFD1-203ENST00000547063 INSL5Q9Y5Q6 135 aa16.64■□□□□ 0.25
TRAFD1-203ENST00000547063 USP3Q9Y6I4 520 aa16.64■□□□□ 0.25
TRAFD1-203ENST00000547063 TCRBV5S1A1TA0A578 114 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 FAM170AA1A519 330 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 USP27XA6NNY8 438 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 MYO1FO00160 1098 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 ATMINO43313 823 aaPredicted RBP16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 HSF2BPO75031 334 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 SEC24AO95486 1093 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 YWHAQP27348 245 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 IRS1P35568 1242 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 PRPF38BQ5VTL8 546 aaKnown RBP16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 SYCE1Q8N0S2 351 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 ELMOD1Q8N336 334 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 TRIM58Q8NG06 486 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 ULBP1Q9BZM6 244 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 CRISPLD1Q9H336 500 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 IL37Q9NZH6 218 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 LMCD1Q9NZU5 365 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 TJP2Q9UDY2 1190 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 TFR2Q9UP52 801 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 COLQQ9Y215 455 aaPredicted RBP16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 DUSP10Q9Y6W6 482 aa16.63■□□□□ 0.25
TRAFD1-203ENST00000547063 KIF2AO00139 706 aaPredicted RBP16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 PIK3R2O00459 728 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 CLASP2O75122 1294 aaKnown RBP16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 GABBR2O75899 941 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 CSPG5O95196 566 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 LRG1P02750 347 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 PSEN1P49768 467 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 DAOAP59103 153 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 YWHAZP63104 245 aaKnown RBP16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 PPP1R15BQ5SWA1 713 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 GPRIN1Q7Z2K8 1008 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 SLC7A14Q8TBB6 771 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 FNIP1Q8TF40 1166 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 TLE6Q9H808 572 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 METTL5Q9NRN9 209 aaKnown RBP16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 UXTQ9UBK9 157 aaPredicted RBP16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 TRIM10Q9UDY6 481 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 IP6K2Q9UHH9 426 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 ANAPC7Q9UJX3 599 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 SCML2Q9UQR0 700 aa16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 MTCL1Q9Y4B5 1905 aaKnown RBP16.62■□□□□ 0.25
TRAFD1-203ENST00000547063 A0A0U1RQJ8 604 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 FAM92AA1XBS5 289 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 TMEM191CA6NGB0 347 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 SLC38A8A6NNN8 435 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 LTFP02788 710 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 C8AP07357 584 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 HNRNPA1P09651 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 USP17L7P0C7H9 530 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 ATF6P18850 670 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 HOXA9P31269 272 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 PPP3CCP48454 512 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 GPR15P49685 360 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 TWF1Q12792 350 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 PIGHQ14442 188 aaPredicted RBP16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 PPM1LQ5SGD2 360 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 C11orf63Q6NUN7 778 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 BEND5Q7L4P6 421 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 PHLDB2Q86SQ0 1253 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 MON1AQ86VX9 555 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 PDZD8Q8NEN9 1154 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 TPCN2Q8NHX9 752 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 SCAMP5Q8TAC9 235 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 ATRIPQ8WXE1 791 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 OVCA2Q8WZ82 227 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 FBXO32Q969P5 355 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 FAM149B1Q96BN6 582 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 TRMT2BQ96GJ1 504 aaKnown RBP16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 MCEEQ96PE7 176 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 NCAPGQ9BPX3 1015 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 TTLL2Q9BWV7 592 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 POPDC2Q9HBU9 364 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 OSGEPQ9NPF4 335 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 TMEM51Q9NW97 253 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 RRN3Q9NYV6 651 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 TMEM59LQ9UK28 342 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 PCDHGC5Q9Y5F6 944 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 PLXNA3P51805 1871 aa16.61■□□□□ 0.25
TRAFD1-203ENST00000547063 COL4A4P53420 1690 aaPredicted RBP16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 EPOPA6NHQ4 379 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 BUB1O43683 1085 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 DAB1O75553 588 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 SOAT2O75908 522 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 IFRD2Q12894 506 aaPredicted RBP16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 ACAP1Q15027 740 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 DUSP6Q16828 381 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 SDHAF4Q5VUM1 108 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 C17orf53Q8N3J3 647 aaPredicted RBP16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 GIPC2Q8TF65 315 aa16.6■□□□□ 0.25
TRAFD1-203ENST00000547063 SLC22A17Q8WUG5 538 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms