RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 DUSP4Q13115 394 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 KCNC3Q14003 757 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 ZNF268Q14587 947 aaPredicted RBP11.81□□□□□ -0.52
TROAP-204ENST00000546776 SMAD2Q15796 467 aaKnown RBP11.81□□□□□ -0.52
TROAP-204ENST00000546776 PTPN20Q4JDL3 420 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 PMF1Q6P1K2 205 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 ZNF662Q6ZS27 426 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 RTL10Q7L3V2 364 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 TMEM110Q86TL2 294 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 ZSCAN30Q86W11 494 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 CCAR2Q8N163 923 aaKnown RBP11.81□□□□□ -0.52
TROAP-204ENST00000546776 VN1R2Q8NFZ6 395 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 SLC22A17Q8WUG5 538 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 HDAC7Q8WUI4 952 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 RIPOR3Q96MK2 946 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 NECTIN4Q96NY8 510 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 CPXM1Q96SM3 734 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 KCNK16Q96T55 309 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 THAP2Q9H0W7 228 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 FBXO44Q9H4M3 255 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 SFXN1Q9H9B4 322 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 CYP4F11Q9HBI6 524 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 AVENQ9NQS1 362 aaPredicted RBP11.81□□□□□ -0.52
TROAP-204ENST00000546776 CNGB3Q9NQW8 809 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 PARVAQ9NVD7 372 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 COMMD8Q9NX08 183 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 MYO1AQ9UBC5 1043 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 LCMT1Q9UIC8 334 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 MTCL1Q9Y4B5 1905 aaKnown RBP11.81□□□□□ -0.52
TROAP-204ENST00000546776 XIRP2A4UGR9 3374 aa11.81□□□□□ -0.52
TROAP-204ENST00000546776 A0A0C4DFX4 3053 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 E5RJQ4 531 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 PJA2O43164 708 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 BEST1O76090 585 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 RTN3O95197 1032 aaPredicted RBP11.8□□□□□ -0.52
TROAP-204ENST00000546776 LCP1P13796 627 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 EPCAMP16422 314 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 SCNN1AP37088 669 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 MTHFRP42898 656 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 RPL34P49207 117 aaKnown RBP11.8□□□□□ -0.52
TROAP-204ENST00000546776 CLCN4P51793 760 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 NAP1L1P55209 391 aaKnown RBP11.8□□□□□ -0.52
TROAP-204ENST00000546776 ADIGQ0VDE8 80 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 ATAT1Q5SQI0 421 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 OR6B2Q6IFH4 312 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 DNAJC24Q6P3W2 148 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 ADHFE1Q8IWW8 467 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 TCEAL8Q8IYN2 117 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 NUP93Q8N1F7 819 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 C3orf20Q8ND61 904 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 ZMIZ2Q8NF64 920 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 RFFLQ8WZ73 363 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 GOLGA1Q92805 767 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 SPATA17Q96L03 361 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 TRIM62Q9BVG3 475 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 SELENOOQ9BVL4 669 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 PACSIN1Q9BY11 444 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 RHOBTB2Q9BYZ6 727 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 ADAM7Q9H2U9 754 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 PLEKHA4Q9H4M7 779 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 LZTFL1Q9NQ48 299 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 KCND1Q9NSA2 647 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 CTTNBP2NLQ9P2B4 639 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 UVRAGQ9P2Y5 699 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 CYTH4Q9UIA0 394 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 SLC27A5Q9Y2P5 690 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 USP15Q9Y4E8 981 aaPredicted RBP11.8□□□□□ -0.52
TROAP-204ENST00000546776 PLXNA3P51805 1871 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 ATG2AQ2TAZ0 1938 aa11.8□□□□□ -0.52
TROAP-204ENST00000546776 MYO7AQ13402 2215 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 MYO16Q9Y6X6 1858 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 TULP2O00295 520 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 TGM5O43548 720 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 LRG1P02750 347 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 ERBB2P04626 1255 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 CYP1A2P05177 515 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 CSH1P0DML2 217 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 CSH2P0DML3 217 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 RRM1P23921 792 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 NOP2P46087 812 aaKnown RBP11.79□□□□□ -0.52
TROAP-204ENST00000546776 TKTL1P51854 596 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 CDR1P51861 262 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 SLC5A3P53794 718 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 CACNA2D1P54289 1103 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 EPHB3P54753 998 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 RBM10P98175 930 aaKnown RBP11.79□□□□□ -0.52
TROAP-204ENST00000546776 SLC6A3Q01959 620 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 PTP4A2Q12974 167 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 CBX2Q14781 532 aaPredicted RBP11.79□□□□□ -0.52
TROAP-204ENST00000546776 TAF12Q16514 161 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 RAB41Q5JT25 222 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 RARS2Q5T160 578 aaKnown RBP11.79□□□□□ -0.52
TROAP-204ENST00000546776 FAM102AQ5T9C2 384 aaPredicted RBP11.79□□□□□ -0.52
TROAP-204ENST00000546776 CYP4A22Q5TCH4 519 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 PLEKHA7Q6IQ23 1121 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 DCUN1D2Q6PH85 259 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 SYCE2Q6PIF2 218 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 DENND5BQ6ZUT9 1274 aa11.79□□□□□ -0.52
TROAP-204ENST00000546776 ITIH5Q86UX2 942 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms