RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PLA2G4CQ9UP65 541 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 E9PBE3 544 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 KLHL41O60662 606 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 TMEM191BP0C7N4 346 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 IL1R2P27930 398 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 CCDC60Q8IWA6 550 aaPredicted RBP15.28■□□□□ 0.04
HOXC11-202ENST00000546378 KLRG1Q96E93 195 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 OXNAD1Q96HP4 312 aaPredicted RBP15.28■□□□□ 0.04
HOXC11-202ENST00000546378 OCEL1Q9H607 264 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 STARD13Q9Y3M8 1113 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 MCF2LO15068 1137 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 USP12O75317 370 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
HOXC11-202ENST00000546378 PDE1BQ01064 536 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 CUL3Q13618 768 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 VGLL4Q14135 290 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 CYTH1Q15438 398 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 CRYGNQ8WXF5 182 aa15.28■□□□□ 0.04
HOXC11-202ENST00000546378 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
HOXC11-202ENST00000546378 AGO4Q9HCK5 861 aaKnown RBP15.28■□□□□ 0.04
HOXC11-202ENST00000546378 AIM2O14862 343 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 PROCP04070 461 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 GSTT1P30711 240 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 SCNN1BP51168 640 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 GRIK3Q13003 919 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 TMED1Q13445 227 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 MOGSQ13724 837 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 MAP1SQ66K74 1059 aaPredicted RBP15.27■□□□□ 0.04
HOXC11-202ENST00000546378 TRMT10BQ6PF06 316 aaKnown RBP15.27■□□□□ 0.04
HOXC11-202ENST00000546378 SPATA24Q86W54 205 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 CPT1BQ92523 772 aa15.27■□□□□ 0.04
HOXC11-202ENST00000546378 ZC3H7BQ9UGR2 993 aaKnown RBP15.27■□□□□ 0.04
HOXC11-202ENST00000546378 UBE4BO95155 1302 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 TCRBV9S1A1TA0A576 114 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 CHRM1P11229 460 aaPredicted RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 NOMO3P69849 1222 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 MRPS35P82673 323 aaKnown RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 COG7P83436 770 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 ZNF200P98182 395 aaPredicted RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 CYP1B1Q16678 543 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 FAM219BQ5XKK7 198 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 DENND1BQ6P3S1 775 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 RAPH1Q70E73 1250 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 TNS4Q8IZW8 715 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 TFAP2BQ92481 460 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 GRAMD1AQ96CP6 724 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 APOL2Q9BQE5 337 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 ZNF358Q9NW07 568 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 UNGP13051 313 aaPredicted RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 SLC34A1Q06495 639 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 CDCA2Q69YH5 1023 aaPredicted RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 ABRAQ8N0Z2 381 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 BBOF1Q8ND07 529 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 SYTL5Q8TDW5 730 aaPredicted RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 LPAR1Q92633 364 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 HEXIM2Q96MH2 286 aaKnown RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 RANBP17Q9H2T7 1088 aaKnown RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 EBF3Q9H4W6 596 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 RNF146Q9NTX7 359 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 KANSL3Q9P2N6 904 aa15.27■□□□□ 0.03
HOXC11-202ENST00000546378 SMG5Q9UPR3 1016 aaKnown RBP15.27■□□□□ 0.03
HOXC11-202ENST00000546378 SPECC1L-ADORA2AF8WAN1 911 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 CCNB1P14635 433 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 EPHX2P34913 555 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 VCPP55072 806 aaKnown RBP15.26■□□□□ 0.03
HOXC11-202ENST00000546378 TFDP3Q5H9I0 405 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 LPIN3Q9BQK8 851 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 RABGEF1Q9UJ41 708 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 USP2O75604 605 aaPredicted RBP15.26■□□□□ 0.03
HOXC11-202ENST00000546378 GNAZP19086 355 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 MCL1Q07820 350 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 SCUBE1Q8IWY4 988 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 B4GALNT2Q8NHY0 566 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 MBOAT7Q96N66 472 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 CCDC134Q9H6E4 229 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 CISHQ9NSE2 258 aa15.26■□□□□ 0.03
HOXC11-202ENST00000546378 M0QYV0 167 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 NOP56O00567 594 aaKnown RBP15.25■□□□□ 0.03
HOXC11-202ENST00000546378 RNF8O76064 485 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 ICAM1P05362 532 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 SERPINB5P36952 375 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 TRAF1Q13077 416 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 SESTD1Q86VW0 696 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 RIBC1Q8N443 379 aaPredicted RBP15.25■□□□□ 0.03
HOXC11-202ENST00000546378 CCNYQ8ND76 341 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 DEPDC1BQ8WUY9 529 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
HOXC11-202ENST00000546378 CNBD2Q96M20 576 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 RNPEPQ9H4A4 650 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 IP6K2Q9UHH9 426 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 FGFR3P22607 806 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 ATXN1P54253 815 aaKnown RBP15.25■□□□□ 0.03
HOXC11-202ENST00000546378 ZC3H12AQ5D1E8 599 aaKnown RBP15.25■□□□□ 0.03
HOXC11-202ENST00000546378 PPM1JQ5JR12 505 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 MOXD1Q6UVY6 613 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 FAM156AQ8NDB6 213 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 ZNF333Q96JL9 665 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 PCDHA10Q9Y5I2 948 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 QSER1Q2KHR3 1735 aa15.25■□□□□ 0.03
HOXC11-202ENST00000546378 ZBED1O96006 694 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms