RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 KAT5Q92993 513 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 CLDN23Q96B33 292 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 ZFYVE19Q96K21 471 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 RNF38Q9H0F5 515 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 CNTN6Q9UQ52 1028 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 SCML2Q9UQR0 700 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
YBX3-217ENST00000546164 ANAPC1Q9H1A4 1944 aa12.54□□□□□ -0.4
YBX3-217ENST00000546164 ZNF638Q14966 1978 aaKnown RBP12.54□□□□□ -0.4
YBX3-217ENST00000546164 FAM170BA6NMN3 283 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 O00370 1275 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 ZXDBP98169 803 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 FZD5Q13467 585 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 MAN2A1Q16706 1144 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 ITPRIPL2Q3MIP1 535 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 RAB41Q5JT25 222 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 CCDC183Q5T5S1 534 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 CC2D1AQ6P1N0 951 aaPredicted RBP12.53□□□□□ -0.4
YBX3-217ENST00000546164 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 GBP6Q6ZN66 633 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 ENOSF1Q7L5Y1 443 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 RALGPS2Q86X27 583 aaPredicted RBP12.53□□□□□ -0.4
YBX3-217ENST00000546164 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
YBX3-217ENST00000546164 OSCP1Q8WVF1 389 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 FAM81BQ96LP2 452 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 KREMEN1Q96MU8 473 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 IRF2BPLQ9H1B7 796 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 CYLDQ9NQC7 956 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 HPS4Q9NQG7 708 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 GKN1Q9NS71 199 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 GTSE1Q9NYZ3 720 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 GMIPQ9P107 970 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 CHORDC1Q9UHD1 332 aaPredicted RBP12.53□□□□□ -0.4
YBX3-217ENST00000546164 TSPAN16Q9UKR8 245 aa12.53□□□□□ -0.4
YBX3-217ENST00000546164 COL4A3Q01955 1670 aa12.52□□□□□ -0.4
YBX3-217ENST00000546164 SPECC1L-ADORA2AF8WAN1 911 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
YBX3-217ENST00000546164 NCAM2O15394 837 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 COCHO43405 550 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 ABL1P00519 1130 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 DCNP07585 359 aaKnown RBP12.52□□□□□ -0.41
YBX3-217ENST00000546164 CD19P15391 556 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 CD72P21854 359 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 CTHP32929 405 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 MTIF2P46199 727 aaKnown RBP12.52□□□□□ -0.41
YBX3-217ENST00000546164 RPS9P46781 194 aaKnown RBP12.52□□□□□ -0.41
YBX3-217ENST00000546164 PSEN1P49768 467 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 KPNA1P52294 538 aaPredicted RBP12.52□□□□□ -0.41
YBX3-217ENST00000546164 BCAT1P54687 386 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 SLC8A3P57103 927 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 TNK2Q07912 1038 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 RUNX3Q13761 415 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 UBXN2BQ14CS0 331 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 STILQ15468 1287 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 EXOC3L4Q17RC7 722 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 PKDCCQ504Y2 493 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 TRIM65Q6PJ69 517 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 LCLAT1Q6UWP7 414 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 RRAGAQ7L523 313 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 PIGZQ86VD9 579 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.41
YBX3-217ENST00000546164 ZNF276Q8N554 614 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 FAM3CQ92520 227 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
YBX3-217ENST00000546164 TLR8Q9NR97 1041 aaKnown RBP12.52□□□□□ -0.41
YBX3-217ENST00000546164 ANO10Q9NW15 660 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 MTF2Q9Y483 593 aaPredicted RBP12.52□□□□□ -0.41
YBX3-217ENST00000546164 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 CPQQ9Y646 472 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 PATJQ8NI35 1801 aa12.52□□□□□ -0.41
YBX3-217ENST00000546164 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
YBX3-217ENST00000546164 LEFTY2O00292 366 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 CYP26A1O43174 497 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 TLR5O60602 858 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 EEF1GP26641 437 aaKnown RBP12.51□□□□□ -0.41
YBX3-217ENST00000546164 PON1P27169 355 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 PLA2G5P39877 138 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 PLA2G4AP47712 749 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 PGFP49763 221 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 NHLH1Q02575 133 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 PDE4CQ08493 712 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
YBX3-217ENST00000546164 CNGA2Q16280 664 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 GOLGA7BQ2TAP0 167 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 EML3Q32P44 896 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 VWA3BQ502W6 1294 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 MIIPQ5JXC2 388 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 TRIM68Q6AZZ1 485 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 SASS6Q6UVJ0 657 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 CREBRFQ8IUR6 639 aa12.51□□□□□ -0.41
YBX3-217ENST00000546164 RBBP8NLQ8NC74 664 aaPredicted RBP12.51□□□□□ -0.41
YBX3-217ENST00000546164 TFAP2BQ92481 460 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms