RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 DPEP3Q9H4B8 488 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 KIAA1586Q9HCI6 787 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 ARHGEF4Q9NR80 690 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 TBC1D14Q9P2M4 693 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 NEUROG3Q9Y4Z2 214 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 GON4LQ3T8J9 2241 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 VPS37CA5D8V6 355 aaPredicted RBP17.74■□□□□ 0.43
CPSF7-225ENST00000545934 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.74■□□□□ 0.43
CPSF7-225ENST00000545934 STAU1O95793 577 aaKnown RBP17.74■□□□□ 0.43
CPSF7-225ENST00000545934 PTPN1P18031 435 aaKnown RBP17.74■□□□□ 0.43
CPSF7-225ENST00000545934 KDSRQ06136 332 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 SNX30Q5VWJ9 437 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 FAM173BQ6P4H8 233 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 ARMCX6Q7L4S7 300 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 EPM2AIP1Q7L775 607 aaPredicted RBP17.74■□□□□ 0.43
CPSF7-225ENST00000545934 TTC30AQ86WT1 665 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 CCDC65Q8IXS2 484 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 KCNV2Q8TDN2 545 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 OVCA2Q8WZ82 227 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 HPS3Q969F9 1004 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 OTUB2Q96DC9 234 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 SLITRK1Q96PX8 696 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 MMS19Q96T76 1030 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 NUSAP1Q9BXS6 441 aaKnown RBP17.74■□□□□ 0.43
CPSF7-225ENST00000545934 B3GNT5Q9BYG0 378 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 ZNF518BQ9C0D4 1074 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 GZF1Q9H116 711 aaPredicted RBP17.74■□□□□ 0.43
CPSF7-225ENST00000545934 SNX25Q9H3E2 840 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 ZDHHC4Q9NPG8 344 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 HCN2Q9UL51 889 aa17.74■□□□□ 0.43
CPSF7-225ENST00000545934 PLXNB3Q9ULL4 1909 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 SRRM3A6NNA2 597 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-225ENST00000545934 HOXC11O43248 304 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-225ENST00000545934 MAP3K13O43283 966 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 TGFB1I1O43294 461 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 MBL2P11226 248 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-225ENST00000545934 GAD2Q05329 585 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 BYSLQ13895 437 aaKnown RBP17.73■□□□□ 0.43
CPSF7-225ENST00000545934 LY6G5CQ5SRR4 150 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 LYSMD4Q5XG99 296 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 HS2ST1Q7LGA3 356 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 NUP93Q8N1F7 819 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 ZNF507Q8TCN5 953 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 HMGB4Q8WW32 186 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 PANK2Q9BZ23 570 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 IL37Q9NZH6 218 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 DMXL2Q8TDJ6 3036 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 PTPRBP23467 1997 aa17.73■□□□□ 0.43
CPSF7-225ENST00000545934 ADAMTS20P59510 1910 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 BAHCC1Q9P281 2608 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 TCRBV21S2A2A0A5A6 115 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 FAM221BA6H8Z2 402 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 CLDN5O00501 218 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 EIF3DO15371 548 aaKnown RBP eCLIP17.72■□□□□ 0.43
CPSF7-225ENST00000545934 COCHO43405 550 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 RTN3O95197 1032 aaPredicted RBP17.72■□□□□ 0.43
CPSF7-225ENST00000545934 ABL1P00519 1130 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 ITPKAP23677 461 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 YWHAQP27348 245 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 MAPK8P45983 427 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 PSMD6Q15008 389 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 SLC39A14Q15043 492 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 SNRNP35Q16560 246 aaKnown RBP17.72■□□□□ 0.43
CPSF7-225ENST00000545934 STXBP4Q6ZWJ1 553 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 B3GALNT2Q8NCR0 500 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 OR6B3Q8NGW1 331 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 ZNF516Q92618 1163 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 CGRRF1Q99675 332 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 XYLT2Q9H1B5 865 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 TNMDQ9H2S6 317 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 SLC32A1Q9H598 525 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 CAPN10Q9HC96 672 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 CD248Q9HCU0 757 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 KBTBD4Q9NVX7 518 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 BCCIPQ9P287 314 aaKnown RBP eCLIP17.72■□□□□ 0.43
CPSF7-225ENST00000545934 MSRB2Q9Y3D2 182 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 STARD13Q9Y3M8 1113 aa17.72■□□□□ 0.43
CPSF7-225ENST00000545934 ATXN2Q99700 1313 aaKnown RBP17.72■□□□□ 0.43
CPSF7-225ENST00000545934 FAM92AA1XBS5 289 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 HYAL3O43820 417 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-225ENST00000545934 TULP3O75386 442 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 ZDHHC11BP0C7U3 371 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 HOXB3P14651 431 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-225ENST00000545934 GABRG2P18507 467 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 PDCP20941 246 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 TUBP50607 506 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 CYP24A1Q07973 514 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 E2F4Q16254 413 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 WDR72Q3MJ13 1102 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 PAQR9Q6ZVX9 377 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 USP28Q96RU2 1077 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 AGPAT3Q9NRZ7 376 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 SLC6A14Q9UN76 642 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 CACNA1EQ15878 2313 aa17.71■□□□□ 0.43
CPSF7-225ENST00000545934 SPAARA0A1B0GVQ0 90 aa17.7■□□□□ 0.42
CPSF7-225ENST00000545934 A0A1W2PQF6 199 aa17.7■□□□□ 0.42
CPSF7-225ENST00000545934 AP5Z1O43299 807 aa17.7■□□□□ 0.42
CPSF7-225ENST00000545934 CAPNS1P04632 268 aa17.7■□□□□ 0.42
CPSF7-225ENST00000545934 SERPINF2P08697 491 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms