RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 STAMBPO95630 424 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 POLR2CP19387 275 aaPredicted RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PIK3CAP42336 1068 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SLC1A1P43005 524 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 KRT6CP48668 564 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PPATQ06203 517 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 LONRF1Q17RB8 773 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 LY6KQ17RY6 165 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 MTERF2Q49AM1 385 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SGO2Q562F6 1265 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 CEP78Q5JTW2 689 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 LLGL2Q6P1M3 1020 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 CYP4V2Q6ZWL3 525 aaPredicted RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 VSIG10LQ86VR7 867 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 ALLCQ8N6M5 410 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 HERVK_113Q902F9 699 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 COPS5Q92905 334 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 ELMO3Q96BJ8 720 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PGM2Q96G03 612 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PPP1R16BQ96T49 567 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 TSG101Q99816 390 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 IFIH1Q9BYX4 1025 aaKnown RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SIAEQ9HAT2 523 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SCPEP1Q9HB40 452 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 MAN1C1Q9NR34 630 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 IGSF5Q9NSI5 407 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SLC38A7Q9NVC3 462 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PLK2Q9NYY3 685 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 RBPJLQ9UBG7 517 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 TBK1Q9UHD2 729 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PCDHGA8Q9Y5G5 932 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PCDHGA3Q9Y5H0 932 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 UBIAD1Q9Y5Z9 338 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 COL11A1P12107 1806 aaPredicted RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 ASTN1O14525 1302 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PITPNM2Q9BZ72 1349 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 ESYT3A0FGR9 886 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 ARHGAP10A1A4S6 786 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 MACROD2A1Z1Q3 448 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SMIM23A6NLE4 172 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SNTNA6NMZ2 147 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PSMG1O95456 288 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 TFAP2AP05549 437 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 HOXB1P14653 301 aaPredicted RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 CBX5P45973 191 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 CASP4P49662 377 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 EIF3BP55884 814 aaKnown RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 HUNKP57058 714 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PPP2R2BQ00005 443 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 DSG1Q02413 1049 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 CUL1Q13616 776 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 KLHL38Q2WGJ6 581 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 LBX2Q6XYB7 198 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 ERI1Q8IV48 349 aaKnown RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 FBXO16Q8IX29 292 aaPredicted RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 FAM178BQ8IXR5 827 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SLAIN1Q8ND83 568 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 PRPF31Q8WWY3 499 aaKnown RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SCYL1Q96KG9 808 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 ACAP3Q96P50 834 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 NACC1Q96RE7 527 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 GRIP2Q9C0E4 1043 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 DDX47Q9H0S4 455 aaKnown RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 MAGEF1Q9HAY2 307 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 CYLDQ9NQC7 956 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 KCNN3Q9UGI6 736 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SEPT9Q9UHD8 586 aaPredicted RBP6.96□□□□□ -1.3
NECAP1-208ENST00000545807 SLC45A1Q9Y2W3 748 aa6.96□□□□□ -1.3
NECAP1-208ENST00000545807 MCM3APO60318 1980 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 DOCK5Q9H7D0 1870 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 SYCE1LA8MT33 242 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 FADS2P1A8MWK0 482 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 SLC16A4O15374 487 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 DKC1O60832 514 aaKnown RBP eCLIP6.95□□□□□ -1.3
NECAP1-208ENST00000545807 KRT36O76013 467 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 DDHD2O94830 711 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 OLFM2O95897 454 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 NR2F2P24468 414 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 EPHB2P29323 1055 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 YWHABP31946 246 aaKnown RBP6.95□□□□□ -1.3
NECAP1-208ENST00000545807 STX2P32856 288 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 QARSP47897 775 aaKnown RBP6.95□□□□□ -1.3
NECAP1-208ENST00000545807 KPNA1P52294 538 aaPredicted RBP6.95□□□□□ -1.3
NECAP1-208ENST00000545807 MLLT6P55198 1093 aaPredicted RBP6.95□□□□□ -1.3
NECAP1-208ENST00000545807 PEX3P56589 373 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 KCTD2Q14681 263 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 CCDC58Q4VC31 144 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 NOL9Q5SY16 702 aaKnown RBP6.95□□□□□ -1.3
NECAP1-208ENST00000545807 AGMOQ6ZNB7 445 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 BEND5Q7L4P6 421 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 PCGF5Q86SE9 256 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 IFNLR1Q8IU57 520 aaPredicted RBP6.95□□□□□ -1.3
NECAP1-208ENST00000545807 RELL1Q8IUW5 271 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 AADATQ8N5Z0 425 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 ACTRT2Q8TDY3 377 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 VTI1AQ96AJ9 217 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 CEP170P1Q96L14 293 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 C12orf42Q96LP6 360 aa6.95□□□□□ -1.3
NECAP1-208ENST00000545807 INPP4AQ96PE3 977 aaPredicted RBP6.95□□□□□ -1.3
NECAP1-208ENST00000545807 CHP1Q99653 195 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms