RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 C3orf38Q5JPI3 329 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 C9orf106Q8NAJ2 232 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 TRIM5Q9C035 493 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 VPS16Q9H269 839 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 C1orf112Q9NSG2 853 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 USP22Q9UPT9 525 aa5.77□□□□□ -1.49
SNHG1-224ENST00000545688 LOC102723971A0A1B0GUV8 181 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 FRS3O43559 492 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 RGS10O43665 173 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 RRP9O43818 475 aaKnown RBP5.76□□□□□ -1.49
SNHG1-224ENST00000545688 RASSF9O75901 435 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 EPHA3P29320 983 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 ITGA8P53708 1063 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 LMAN2Q12907 356 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 PPP2R5AQ15172 486 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 Q4G0T1 1027 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 ARHGAP29Q52LW3 1261 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 PTCHD4Q6ZW05 846 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 ADAMTS18Q8TE60 1221 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 NMD3Q96D46 503 aaKnown RBP5.76□□□□□ -1.49
SNHG1-224ENST00000545688 ZC3H10Q96K80 434 aaKnown RBP5.76□□□□□ -1.49
SNHG1-224ENST00000545688 EFHD1Q9BUP0 239 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 VN1R3Q9BXE9 311 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 STK31Q9BXU1 1019 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 TUBA8Q9NY65 449 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-224ENST00000545688 ELOVL5Q9NYP7 299 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 TPCN1Q9ULQ1 816 aa5.76□□□□□ -1.49
SNHG1-224ENST00000545688 SCAF8Q9UPN6 1271 aaKnown RBP5.76□□□□□ -1.49
SNHG1-224ENST00000545688 ISM1B1AKI9 464 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 TMEM232C9JQI7 657 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 E5RJQ4 531 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 PPEF2O14830 753 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 CCP110O43303 1012 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 GCATO75600 419 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 IGKV2-30P06310 120 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 HGFP14210 728 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 ITGB6P18564 788 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 PTDSS1P48651 473 aaKnown RBP5.75□□□□□ -1.49
SNHG1-224ENST00000545688 DIO1P49895 249 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 MTHFSP49914 203 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 TIRAPP58753 221 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 RPS16P62249 146 aaKnown RBP5.75□□□□□ -1.49
SNHG1-224ENST00000545688 TIAL1Q01085 375 aaKnown RBP eCLIP5.75□□□□□ -1.49
SNHG1-224ENST00000545688 CNGA2Q16280 664 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 AWAT1Q58HT5 328 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 NXNQ6DKJ4 435 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 RAB11FIP4Q86YS3 637 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 TCEAL8Q8IYN2 117 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 MAGEB6Q8N7X4 407 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 ZBTB9Q96C00 473 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 CTHRC1Q96CG8 243 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 ZBTB45Q96K62 511 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-224ENST00000545688 FYTTD1Q96QD9 318 aaKnown RBP5.75□□□□□ -1.49
SNHG1-224ENST00000545688 AFF4Q9UHB7 1163 aaKnown RBP5.75□□□□□ -1.49
SNHG1-224ENST00000545688 DDX20Q9UHI6 824 aaKnown RBP5.75□□□□□ -1.49
SNHG1-224ENST00000545688 HDAC9Q9UKV0 1011 aa5.75□□□□□ -1.49
SNHG1-224ENST00000545688 BTBD19C9JJ37 291 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 M0R3H8 397 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 FCHO1O14526 889 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 SPRY2O43597 315 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 BMP15O95972 392 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 MT-CO3P00414 261 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 S100BP04271 92 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-224ENST00000545688 APEHP13798 732 aaKnown RBP5.74□□□□□ -1.49
SNHG1-224ENST00000545688 ZKSCAN1P17029 563 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-224ENST00000545688 ATP5F1P24539 256 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-224ENST00000545688 IL1R2P27930 398 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 COPB1P53618 953 aaKnown RBP5.74□□□□□ -1.49
SNHG1-224ENST00000545688 ARHGEF7Q14155 803 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 ZNF268Q14587 947 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-224ENST00000545688 RABEP1Q15276 862 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 NPY5RQ15761 445 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 ZNF813Q6ZN06 617 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 WDYHV1Q96HA8 205 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 CCDC17Q96LX7 622 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 FAM118BQ9BPY3 351 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 FAM204AQ9H8W3 233 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 EID1Q9Y6B2 187 aa5.74□□□□□ -1.49
SNHG1-224ENST00000545688 AGPSO00116 658 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 PIAS2O75928 621 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 IL1R1P14778 569 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 CREB1P16220 341 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 FMO1Q01740 532 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 TRIP6Q15654 476 aaKnown RBP5.73□□□□□ -1.49
SNHG1-224ENST00000545688 ZNF750Q32MQ0 723 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 LINC01465Q8N7H1 131 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 FAM156AQ8NDB6 213 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 PRSS3P2Q8NHM4 247 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 LRTOMTQ8WZ04 291 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 WDR26Q9H7D7 661 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 SNX15Q9NRS6 342 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 TRNAU1APQ9NX07 287 aaKnown RBP5.73□□□□□ -1.49
SNHG1-224ENST00000545688 COL20A1Q9P218 1284 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 CCDC180Q9P1Z9 1646 aa5.73□□□□□ -1.49
SNHG1-224ENST00000545688 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-224ENST00000545688 RAB27BO00194 218 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 DSCR3O14972 297 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 A1BGP04217 495 aa5.72□□□□□ -1.49
SNHG1-224ENST00000545688 PHKG2P15735 406 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms