RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TEAD2Q15562 447 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.85□□□□□ -1.15
CPSF7-224ENST00000544990 TCERG1LQ5VWI1 586 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 KLHL10Q6JEL2 608 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 VSTM1Q6UX27 236 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 DNAJC14Q6Y2X3 702 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-224ENST00000544990 TMC8Q8IU68 726 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 SCN4BQ8IWT1 228 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 TRIML1Q8N9V2 468 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 SHKBP1Q8TBC3 707 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 ZSCAN18Q8TBC5 510 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-224ENST00000544990 MYCBPAPQ8TBZ2 947 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 SMARCD2Q92925 531 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 ELSPBP1Q96BH3 223 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 EEF2KMTQ96G04 330 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 TNIP3Q96KP6 325 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 CEP295NLQ96MC4 621 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 CEP63Q96MT8 703 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 PKMYT1Q99640 499 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 KXD1Q9BQD3 176 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 LPIN3Q9BQK8 851 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 LRRC3Q9BY71 257 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 KCNH6Q9H252 994 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 SMOC2Q9H3U7 446 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 MMRN2Q9H8L6 949 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 METTL14Q9HCE5 456 aaKnown RBP7.85□□□□□ -1.15
CPSF7-224ENST00000544990 TMEM8AQ9HCN3 771 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 SLC2A4RGQ9NR83 387 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 EHD2Q9NZN4 543 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 ARMCX3Q9UH62 379 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-224ENST00000544990 MAGED2Q9UNF1 606 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-224ENST00000544990 DENND4CQ5VZ89 1909 aa7.85□□□□□ -1.15
CPSF7-224ENST00000544990 MYH10P35580 1976 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 ATP8B3O60423 1300 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 PTPRDP23468 1912 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 TRIM49BA6NDI0 452 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 SOBPA7XYQ1 873 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 GOLGA6L22H0YM25 854 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 BIN1O00499 593 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 HCRTO43612 131 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 NARSO43776 548 aaKnown RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 MOSPD3O75425 235 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 FGFR1OPO95684 399 aaKnown RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 ASS1P00966 412 aaKnown RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 BDNFP23560 247 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 DDX6P26196 483 aaKnown RBP eCLIP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 MSX1P28360 303 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 PLA2G5P39877 138 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 MXI1P50539 228 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 PMS1P54277 932 aaKnown RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 CDH8P55286 799 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 GPC5P78333 572 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 CAMK4Q16566 473 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 DDR2Q16832 855 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 CCDC40Q4G0X9 1142 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 DCAF17Q5H9S7 520 aaPredicted RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 MDH1BQ5I0G3 518 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 FAM78AQ5JUQ0 283 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 C1orf220Q5T0J3 134 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 GPR158Q5T848 1215 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 TANGO2Q6ICL3 276 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 FOXR2Q6PJQ5 311 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 SCARA5Q6ZMJ2 495 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 CLEC17AQ6ZS10 378 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 GAREM2Q75VX8 874 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 TRIM46Q7Z4K8 759 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 FRMD5Q7Z6J6 570 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 FILIP1Q7Z7B0 1213 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 UNC93AQ86WB7 457 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 TREML1Q86YW5 311 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 ZC3H3Q8IXZ2 948 aaKnown RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 RGL4Q8IZJ4 473 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 B3GALNT2Q8NCR0 500 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 FBXL13Q8NEE6 735 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 ST13P5Q8NFI4 369 aaPredicted RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 GPR152Q8TDT2 470 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 DEPDC1BQ8WUY9 529 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 NELFBQ8WX92 580 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 MRPS31Q92665 395 aaKnown RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 MYLPFQ96A32 169 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 PCED1BQ96HM7 432 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 FAXDC2Q96IV6 333 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 SHDQ96IW2 340 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 IPO9Q96P70 1041 aaKnown RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 GBP4Q96PP9 640 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 PRRX2Q99811 253 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 RPP25Q9BUL9 199 aaKnown RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 RBCK1Q9BYM8 510 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 ELOVL4Q9GZR5 314 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 TASP1Q9H6P5 420 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 SMYD3Q9H7B4 428 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 CYP3A43Q9HB55 503 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 TRPV4Q9HBA0 871 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 ZNF334Q9HCZ1 680 aaPredicted RBP7.84□□□□□ -1.15
CPSF7-224ENST00000544990 CRTAC1Q9NQ79 661 aa7.84□□□□□ -1.15
CPSF7-224ENST00000544990 GREB1Q4ZG55 1949 aa7.84□□□□□ -1.16
CPSF7-224ENST00000544990 NUP210Q8TEM1 1887 aaPredicted RBP7.83□□□□□ -1.16
CPSF7-224ENST00000544990 SLC38A8A6NNN8 435 aa7.83□□□□□ -1.16
CPSF7-224ENST00000544990 NOL4O94818 638 aa7.83□□□□□ -1.16
CPSF7-224ENST00000544990 GNA14O95837 355 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms