RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ELFN1P0C7U0 828 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 JUPP14923 745 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 DRD4P21917 467 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 EEF1GP26641 437 aaKnown RBP2.8□□□□□ -1.96
YBX3-214ENST00000544501 SLC5A2P31639 672 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 CYP2C18P33260 490 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 PLA2G5P39877 138 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 MTHFSP49914 203 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 CCT8P50990 548 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 CLCN2P51788 898 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 PGDP52209 483 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 ITGA8P53708 1063 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 PDE1AP54750 535 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 ELLP55199 621 aaPredicted RBP2.8□□□□□ -1.96
YBX3-214ENST00000544501 TPTEP56180 551 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 EEFSECP57772 596 aaKnown RBP2.8□□□□□ -1.96
YBX3-214ENST00000544501 STK3Q13188 491 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 PMS2P11Q13670 270 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 MORC3Q14149 939 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 CLCA4Q14CN2 919 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 BRD3Q15059 726 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 LY6KQ17RY6 165 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 KRTAP15-1Q3LI76 137 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 FAM153CQ494X1 144 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 TMEM63BQ5T3F8 832 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 STRIP1Q5VSL9 837 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 MRNIPQ6NTE8 343 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 KIAA0408Q6ZU52 694 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 Q6ZWC4 215 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 ZNF804AQ7Z570 1209 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 LRRC71Q8N4P6 559 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 SIRT6Q8N6T7 355 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 ABHD11Q8NFV4 315 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 MBD3L2Q8NHZ7 208 aaPredicted RBP2.8□□□□□ -1.96
YBX3-214ENST00000544501 XAGE5Q8WWM1 108 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 NELL1Q92832 810 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 BBC3Q96PG8 261 aaPredicted RBP2.8□□□□□ -1.96
YBX3-214ENST00000544501 SELENOOQ9BVL4 669 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 DPCDQ9BVM2 203 aaPredicted RBP2.8□□□□□ -1.96
YBX3-214ENST00000544501 FSD1LQ9BXM9 530 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 SLITRK6Q9H5Y7 841 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 CERS4Q9HA82 394 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 NECTIN3Q9NQS3 549 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 TM7SF3Q9NS93 570 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 SEMA4GQ9NTN9 838 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 TMOD4Q9NZQ9 345 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 NKX1-2Q9UD57 310 aaPredicted RBP2.8□□□□□ -1.96
YBX3-214ENST00000544501 ZNHIT2Q9UHR6 403 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 VPS51Q9UID3 782 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 HPSEQ9Y251 543 aa2.8□□□□□ -1.96
YBX3-214ENST00000544501 OR2W5A6NFC9 320 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 A8MVJ9 347 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 H0YIZ8 118 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 PLA2G6O60733 806 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 COQ9O75208 318 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 PMPCBO75439 489 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ERBB2P04626 1255 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 EBLN1P0CF75 366 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 SETSIPP0DME0 302 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 HARSP12081 509 aaKnown RBP2.79□□□□□ -1.96
YBX3-214ENST00000544501 MYCLP12524 364 aaPredicted RBP2.79□□□□□ -1.96
YBX3-214ENST00000544501 HGFP14210 728 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 GPD1P21695 349 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 BMP5P22003 454 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 GABRB3P28472 473 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 RBL1P28749 1068 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ATICP31939 592 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 GKP32189 559 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 CLK3P49761 638 aaKnown RBP2.79□□□□□ -1.96
YBX3-214ENST00000544501 INHBEP58166 350 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 SUMO2P61956 95 aaKnown RBP2.79□□□□□ -1.96
YBX3-214ENST00000544501 KCNAB1Q14722 419 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 CYP1B1Q16678 543 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ST3GAL2Q16842 350 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 SLC35G1Q2M3R5 365 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ZNF362Q5T0B9 420 aaPredicted RBP2.79□□□□□ -1.96
YBX3-214ENST00000544501 TSTD2Q5T7W7 516 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 FAXCQ5TGI0 409 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 RRAGBQ5VZM2 374 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 DENND2CQ68D51 928 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 CEP85Q6P2H3 762 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 SLC29A4Q7RTT9 530 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 MORC1Q86VD1 984 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 TXLNBQ8N3L3 684 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 FAM98AQ8NCA5 519 aaKnown RBP2.79□□□□□ -1.96
YBX3-214ENST00000544501 ABHD5Q8WTS1 349 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ZNF566Q969W8 418 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 SARAFQ96BY9 339 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 LRRC46Q96FV0 321 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ZBTB45Q96K62 511 aaPredicted RBP2.79□□□□□ -1.96
YBX3-214ENST00000544501 HIST1H2AAQ96QV6 131 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 THAP7Q9BT49 309 aaPredicted RBP2.79□□□□□ -1.96
YBX3-214ENST00000544501 SLC25A32Q9H2D1 315 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 RIOX1Q9H6W3 641 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 ARFGAP3Q9NP61 516 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 SLC52A1Q9NWF4 448 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 RGL1Q9NZL6 768 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 FNIP2Q9P278 1114 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 STEAP1Q9UHE8 339 aa2.79□□□□□ -1.96
YBX3-214ENST00000544501 AMFRQ9UKV5 643 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms