RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GOLGA1Q92805 767 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 PGLYRP2Q96PD5 576 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 LBHD1Q9BQE6 289 aaPredicted RBP31.9■■■□□ 2.7
CCM2-219ENST00000544363 HERC2P3Q9BVR0 1158 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 SART1O43290 800 aaKnown RBP31.89■■■□□ 2.7
CCM2-219ENST00000544363 PPM1AP35813 382 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 MAGEA11P43364 429 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 PSMD5Q16401 504 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 DDX53Q86TM3 631 aaKnown RBP31.89■■■□□ 2.7
CCM2-219ENST00000544363 HERC6Q8IVU3 1022 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 KATNAL2Q8IYT4 538 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 FBXO22Q8NEZ5 403 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 CFAP57Q96MR6 1250 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 ZBED1O96006 694 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 HADHQ16836 314 aaKnown RBP31.89■■■□□ 2.7
CCM2-219ENST00000544363 C15orf59Q2T9L4 293 aaPredicted RBP31.89■■■□□ 2.7
CCM2-219ENST00000544363 SCN4BQ8IWT1 228 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 SCML4Q8N228 414 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 FAM149B1Q96BN6 582 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 DDX23Q9BUQ8 820 aaKnown RBP31.89■■■□□ 2.7
CCM2-219ENST00000544363 PLVAPQ9BX97 442 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP31.89■■■□□ 2.79e-7■■■■□ 19.3
CCM2-219ENST00000544363 PCDHB12Q9Y5F1 795 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 CDY1Q9Y6F8 540 aa31.89■■■□□ 2.7
CCM2-219ENST00000544363 DAB1O75553 588 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 USP17L7P0C7H9 530 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 DESP17661 470 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 PCK1P35558 622 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 PTPN9P43378 593 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 YWHAZP63104 245 aaKnown RBP31.88■■■□□ 2.69
CCM2-219ENST00000544363 TUBB4BP68371 445 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 DSG1Q02413 1049 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 CLUL1Q15846 466 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 SLC8B1Q6J4K2 584 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 AADACL2Q6P093 401 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 ATAD1Q8NBU5 361 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 SPPL2BQ8TCT7 592 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 C2orf15Q8WU43 125 aaKnown RBP31.88■■■□□ 2.69
CCM2-219ENST00000544363 UBXN4Q92575 508 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 DPF3Q92784 378 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 C8orf48Q96LL4 319 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 RAD9AQ99638 391 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 NOL12Q9UGY1 213 aaKnown RBP eCLIP31.88■■■□□ 2.69
CCM2-219ENST00000544363 USP3Q9Y6I4 520 aa31.88■■■□□ 2.69
CCM2-219ENST00000544363 V9GYY5 206 aaPredicted RBP31.88■■■□□ 2.69
CCM2-219ENST00000544363 MTMR11A4FU01 709 aa31.87■■■□□ 2.69
CCM2-219ENST00000544363 TRIM66O15016 1216 aa31.87■■■□□ 2.69
CCM2-219ENST00000544363 FGGP02679 453 aa31.87■■■□□ 2.69
CCM2-219ENST00000544363 GJC1P36383 396 aa31.87■■■□□ 2.69
CCM2-219ENST00000544363 SLC25A11Q02978 314 aaKnown RBP31.87■■■□□ 2.69
CCM2-219ENST00000544363 PM20D1Q6GTS8 502 aa31.87■■■□□ 2.69
CCM2-219ENST00000544363 POLNQ7Z5Q5 900 aa31.87■■■□□ 2.69
CCM2-219ENST00000544363 MTIF3Q9H2K0 278 aaKnown RBP31.87■■■□□ 2.69
CCM2-219ENST00000544363 PATJQ8NI35 1801 aa31.87■■■□□ 2.69
CCM2-219ENST00000544363 KIAA1671Q9BY89 1806 aa31.87■■■□□ 2.69
CCM2-219ENST00000544363 TNFRSF10BO14763 440 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 ATP2A2P16615 1042 aaKnown RBP31.86■■■□□ 2.69
CCM2-219ENST00000544363 MIPP30301 263 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 MATKP42679 507 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 GLUD2P49448 558 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 C2orf54Q08AI8 447 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 TEX35Q5T0J7 233 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 SH3PXD2AQ5TCZ1 1133 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 RNF19BQ6ZMZ0 732 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 DEFB106AQ8N104 65 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 EXD1Q8NHP7 514 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 IRGQQ8WZA9 623 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 NAP1L3Q99457 506 aaPredicted RBP31.86■■■□□ 2.69
CCM2-219ENST00000544363 NCAPGQ9BPX3 1015 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 C11orf84Q9BUA3 381 aaPredicted RBP31.86■■■□□ 2.69
CCM2-219ENST00000544363 LINC00271P0C7V0 271 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 ATP11AP98196 1134 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 NAA30Q147X3 362 aaPredicted RBP31.86■■■□□ 2.69
CCM2-219ENST00000544363 CDO1Q16878 200 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 ERCC6LQ2NKX8 1250 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 TXNRD3NBQ6F5E7 133 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 NOA1Q8NC60 698 aaKnown RBP31.86■■■□□ 2.69
CCM2-219ENST00000544363 SP7Q8TDD2 431 aaPredicted RBP31.86■■■□□ 2.69
CCM2-219ENST00000544363 CLP1Q92989 425 aaKnown RBP31.86■■■□□ 2.69
CCM2-219ENST00000544363 SLC2A13Q96QE2 648 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 POPDC2Q9HBU9 364 aa31.86■■■□□ 2.69
CCM2-219ENST00000544363 DDX56Q9NY93 547 aaKnown RBP31.86■■■□□ 2.69
CCM2-219ENST00000544363 YJEFN3A6XGL0 299 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 E7ENQ6 273 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 C2CD2LO14523 706 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 ADAM12O43184 909 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 ZRANB2O95218 330 aaKnown RBP eCLIP31.85■■■□□ 2.69
CCM2-219ENST00000544363 VNN2O95498 520 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 KRT7P08729 469 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 SLC5A3P53794 718 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 LONRF2Q1L5Z9 754 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 ATP13A4Q4VNC1 1196 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 HFE2Q6ZVN8 426 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 FAM172AQ8WUF8 416 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 USP18Q9UMW8 372 aa31.85■■■□□ 2.69
CCM2-219ENST00000544363 IL1R2P27930 398 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 OR1D2P34982 312 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 NOS2P35228 1153 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 ROR1Q01973 937 aa31.84■■■□□ 2.69
CCM2-219ENST00000544363 DDR2Q16832 855 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms