RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 PDHXO00330 501 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 ATP2A2P16615 1042 aaKnown RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 SSTR1P30872 391 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 HOXA11P31270 313 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 ZKSCAN8Q15776 578 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 PPP1R26Q5T8A7 1209 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 PMF1Q6P1K2 205 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 DARS2Q6PI48 645 aaKnown RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 CAPN12Q6ZSI9 719 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 C3orf62Q6ZUJ4 267 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 TTC30AQ86WT1 665 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 FBF1Q8TES7 1133 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 SLC35F5Q8WV83 523 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 KHSRPQ92945 711 aaKnown RBP eCLIP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 ALKBH8Q96BT7 664 aaKnown RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 PIWIL1Q96J94 861 aaKnown RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 PAFAH2Q99487 392 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 MRPL45Q9BRJ2 306 aaKnown RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 KIF9Q9HAQ2 790 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 USP29Q9HBJ7 922 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 KLHL14Q9P2G3 628 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 MDM4O15151 490 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 SPAG6O75602 509 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 NPTXRO95502 500 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 SMPD1P17405 629 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 IL4RP24394 825 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 SCNN1AP37088 669 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 MAGEA6P43360 314 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 NCALDP61601 193 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 ELF3P78545 371 aaPredicted RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 SF3A3Q12874 501 aaKnown RBP eCLIP18.49■□□□□ 0.553e-6■■■□□ 15.4
SCARB1-208ENST00000544327 KRT81Q14533 505 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 DGKDQ16760 1214 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 FAM133BQ5BKY9 247 aaKnown RBP18.49■□□□□ 0.55
SCARB1-208ENST00000544327 SLC9A4Q6AI14 798 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 DPY19L2Q6NUT2 758 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 SLC27A1Q6PCB7 646 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 NPNTQ6UXI9 565 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 DPH6Q7L8W6 267 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 PALM2Q8IXS6 379 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 PLD5Q8N7P1 536 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 C12orf29Q8N999 325 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 DCAKDQ8WVC6 231 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 PAK5Q9P286 719 aa18.49■□□□□ 0.55
SCARB1-208ENST00000544327 PDCD11Q14690 1871 aaKnown RBP18.48■□□□□ 0.55
SCARB1-208ENST00000544327 A0A1W2PPM1 405 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 CHUKO15111 745 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 CAPN15O75808 1086 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 RPA3P35244 121 aaPredicted RBP18.48■□□□□ 0.55
SCARB1-208ENST00000544327 SKIV2L2P42285 1042 aaKnown RBP18.48■□□□□ 0.55
SCARB1-208ENST00000544327 BASP1P80723 227 aaKnown RBP18.48■□□□□ 0.55
SCARB1-208ENST00000544327 ADCY1Q08828 1119 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 GRB14Q14449 540 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 SNCBQ16143 134 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 BBS9Q3SYG4 887 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 RAB6CQ53S08 254 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 IQSEC1Q6DN90 963 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 ALKAL1Q6UXT8 129 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 ARCQ7LC44 396 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 C4orf33Q8N1A6 199 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 PQLC3Q8N755 202 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 BEST2Q8NFU1 509 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.48■□□□□ 0.55
SCARB1-208ENST00000544327 FBXO41Q8TF61 875 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 MS4A4AQ96JQ5 239 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 ZMAT2Q96NC0 199 aaKnown RBP18.48■□□□□ 0.55
SCARB1-208ENST00000544327 ZNF670Q9BS34 389 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 GCOM2Q9BZD3 368 aaPredicted RBP18.48■□□□□ 0.55
SCARB1-208ENST00000544327 RAB6CQ9H0N0 254 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 PCDH18Q9HCL0 1135 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 PNPLA8Q9NP80 782 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 GRID1Q9ULK0 1009 aa18.48■□□□□ 0.55
SCARB1-208ENST00000544327 BCLAF3A2AJT9 711 aaKnown RBP18.47■□□□□ 0.55
SCARB1-208ENST00000544327 APOL1O14791 398 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 DESP17661 470 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 CA4P22748 312 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 SDC4P31431 198 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 MSH2P43246 934 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 RPL34P49207 117 aaKnown RBP18.47■□□□□ 0.55
SCARB1-208ENST00000544327 EFTUD2Q15029 972 aaKnown RBP eCLIP18.47■□□□□ 0.555e-7■■■■□ 26.1
SCARB1-208ENST00000544327 SLC1A5Q15758 541 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 ANKRD23Q86SG2 305 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 OR6J1Q8NGC5 347 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 MAML3Q96JK9 1138 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 CYTH2Q99418 400 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 CYLDQ9NQC7 956 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 CNTN3Q9P232 1028 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 NME7Q9Y5B8 376 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 SNX9Q9Y5X1 595 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 TEX264Q9Y6I9 313 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 SCN1AP35498 2009 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 ZNF236Q9UL36 1845 aa18.47■□□□□ 0.55
SCARB1-208ENST00000544327 BTBD19C9JJ37 291 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 H7C0C1 242 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 TM9SF1O15321 606 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 EDF1O60869 148 aaKnown RBP18.46■□□□□ 0.55
SCARB1-208ENST00000544327 GPR32O75388 356 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 PTPN9P43378 593 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 ATP5OP48047 213 aa18.46■□□□□ 0.55
SCARB1-208ENST00000544327 RGS7P49802 495 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms