RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 FRMD8Q9BZ67 464 aaPredicted RBP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 POLR1BQ9H9Y6 1135 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 WDR41Q9HAD4 459 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 UBA2Q9UBT2 640 aaPredicted RBP10.74□□□□□ -0.69
PCDH9-204ENST00000544246 STK39Q9UEW8 545 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 RAD54BQ9Y620 910 aa10.74□□□□□ -0.69
PCDH9-204ENST00000544246 GRK4P32298 578 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 STAT5AP42229 794 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 STAT5BP51692 787 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 RAD23AP54725 363 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 CCNIQ14094 377 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TDRD10Q5VZ19 366 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 FBXO42Q6P3S6 717 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 CLYBLQ8N0X4 340 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 SPIRE2Q8WWL2 714 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 NACC2Q96BF6 587 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 SLC9A7Q96T83 725 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 BARHL2Q9NY43 387 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 PSMD12O00232 456 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 CYP7B1O75881 506 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 CLPTM1O96005 669 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 CYP2D6P10635 497 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 PABPC1P11940 636 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TNNI3P19429 210 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 PSMD4P55036 377 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 POLD3Q15054 466 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ESRP1Q6NXG1 681 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ARID3BQ8IVW6 561 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 UTP15Q8TED0 518 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 NMD3Q96D46 503 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 SPHKAPQ2M3C7 1700 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ATP7BP35670 1465 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ATG7O95352 703 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TMED8Q6PL24 325 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 RAET1EQ8TD07 263 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 FAM120BQ96EK7 910 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 APOL4Q9BPW4 351 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 UBE2OQ9C0C9 1292 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 PHTF1Q9UMS5 762 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 NPHP3-ACAD11A0A0J9YXS1 232 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 KCNQ2O43526 872 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 BMP10O95393 424 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 FDX1P10109 184 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ALOX12P18054 663 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 PAICSP22234 425 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 DSG3P32926 999 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 GALCP54803 685 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ITIH4Q14624 930 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 DGUOKQ16854 277 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 FAM71DQ8N9W8 422 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 MAGED4Q96JG8 741 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 GPR101Q96P66 508 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 CCDC3Q9BQI4 270 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF304Q9HCX3 659 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 METTL5Q9NRN9 209 aaKnown RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 COPG2Q9UBF2 871 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TRPC4Q9UBN4 977 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 A0A087X0T9 212 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TRIM49D1C9J1S8 452 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 MYL12BO14950 172 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 RPN2P04844 631 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TSPAN19P0C672 248 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 RARBP10826 455 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 YY1P25490 414 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF177Q13360 481 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 DCAF6Q58WW2 860 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 DDI2Q5TDH0 399 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TIGD7Q6NT04 549 aaPredicted RBP10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TRAPPC11Q7Z392 1133 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 PIGBQ92521 554 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ZBTB10Q96DT7 871 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 TMEM79Q9BSE2 394 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 NT5C1AQ9BXI3 368 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 SH3BP4Q9P0V3 963 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ENOPH1Q9UHY7 261 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 ZBTB1Q9Y2K1 713 aa10.73□□□□□ -0.69
PCDH9-204ENST00000544246 EFCAB10A6NFE3 127 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 ERVV-1B6SEH8 477 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 SMIM22K7EJ46 135 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 WWP2O00308 870 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 GRAP2O75791 330 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 LRG1P02750 347 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 MYL12AP19105 171 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TGM2P21980 687 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 NMT1P30419 496 aaKnown RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 RCAN1P53805 252 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 DPYDQ12882 1025 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TRAF3Q13114 568 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PLCL1Q15111 1095 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 LPCAT2Q7L5N7 544 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 HOMEZQ8IX15 550 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PHACTR4Q8IZ21 702 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 FMR1NBQ8N0W7 255 aaPredicted RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 ZCCHC7Q8N3Z6 543 aaKnown RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 BLOC1S5Q8TDH9 187 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TRPC4APQ8TEL6 797 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 SLC16A10Q8TF71 515 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 LNPEPQ9UIQ6 1025 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms