RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 RNF157Q96PX1 679 aa16.81■□□□□ 0.28
SCNN1A-221ENST00000543768 GCOM2Q9BZD3 368 aaPredicted RBP16.81■□□□□ 0.28
SCNN1A-221ENST00000543768 PPCSQ9HAB8 311 aa16.81■□□□□ 0.28
SCNN1A-221ENST00000543768 FAM49BQ9NUQ9 324 aa16.81■□□□□ 0.28
SCNN1A-221ENST00000543768 GJD2Q9UKL4 321 aa16.81■□□□□ 0.28
SCNN1A-221ENST00000543768 PDCD11Q14690 1871 aaKnown RBP16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 PRPF4O43172 522 aaKnown RBP eCLIP16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 SPAG7O75391 227 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 RASSF9O75901 435 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 ASMTLO95671 621 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 STIP1P31948 543 aaKnown RBP16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 FOXN2P32314 431 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 ZC3H18Q86VM9 953 aaKnown RBP16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 SCUBE3Q8IX30 993 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 OSMRQ99650 979 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 TRABDQ9H4I3 376 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 RNF19AQ9NV58 838 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 SUFUQ9UMX1 484 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 PAPSS1O43252 624 aaPredicted RBP16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 TAC1P20366 129 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 SLC18A1P54219 525 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 SLC6A3Q01959 620 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 TFDP2Q14188 446 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 GLRA4Q5JXX5 417 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 PLEKHH3Q7Z736 793 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 LRRC52Q8N7C0 313 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 ATP11CQ8NB49 1132 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 FBXO36Q8NEA4 188 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 LPIN3Q9BQK8 851 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 ABCF3Q9NUQ8 709 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 FETUBQ9UGM5 382 aa16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 XPO7Q9UIA9 1087 aaKnown RBP16.8■□□□□ 0.28
SCNN1A-221ENST00000543768 SMAPO00193 183 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 SETSIPP0DME0 302 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 KRT15P19012 456 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 GEMIN4P57678 1058 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 ROR1Q01973 937 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 SOWAHAQ2M3V2 549 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 BOLA3Q53S33 107 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 ZC3H12AQ5D1E8 599 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 FAM47CQ5HY64 1035 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 CGB2Q6NT52 195 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 NOTUMQ6P988 496 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 DARS2Q6PI48 645 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 C3orf62Q6ZUJ4 267 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 BEST2Q8NFU1 509 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 MRRFQ96E11 262 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 PTPN18Q99952 460 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 USP29Q9HBJ7 922 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 SLC40A1Q9NP59 571 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 SENP1Q9P0U3 644 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 PSMC3IPQ9P2W1 217 aaPredicted RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 SLC12A4Q9UP95 1085 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 A0A1W2PPM1 405 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 A6NJR5 290 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 SMIM10L2AP0DMW4 78 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 SMIM10L2BP0DMW5 78 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 BASP1P80723 227 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 MTM1Q13496 603 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 HIC1Q14526 733 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 EFTUD2Q15029 972 aaKnown RBP eCLIP16.79■□□□□ 0.284e-6■■■■□ 25.8
SCNN1A-221ENST00000543768 PDK2Q15119 407 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 ZKSCAN8Q15776 578 aaPredicted RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 C9orf57Q5W0N0 161 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 SCYL2Q6P3W7 929 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 APBB1IPQ7Z5R6 666 aaPredicted RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 PNMA8AQ86V59 439 aaPredicted RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 PLD5Q8N7P1 536 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 FAM172AQ8WUF8 416 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 DHRS4Q9BTZ2 278 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 B3GNT5Q9BYG0 378 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 ADAM33Q9BZ11 813 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 DPEP3Q9H4B8 488 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 NXF3Q9H4D5 531 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 NGRNQ9NPE2 291 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 GPATCH2LQ9NWQ4 482 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 CNTN3Q9P232 1028 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 PRKAG3Q9UGI9 489 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 CLEC11AQ9Y240 323 aa16.79■□□□□ 0.28
SCNN1A-221ENST00000543768 NRCAMQ92823 1304 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 DOCK3Q8IZD9 2030 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 MBLAC1A4D2B0 266 aaPredicted RBP16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 IQCA1LA6NCM1 817 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 DYNC1LI2O43237 492 aaPredicted RBP16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 HCRTO43612 131 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 DNAJC8O75937 253 aaPredicted RBP16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 RECQL4O94761 1208 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 DARSP14868 501 aaKnown RBP16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 PHBP35232 272 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 YARSP54577 528 aaKnown RBP16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 CDC42EP1Q00587 391 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 IL9RQ01113 521 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 FAM110CQ1W6H9 321 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 C1orf228Q6PIY5 440 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 UNC93AQ86WB7 457 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 PDIK1LQ8N165 341 aa16.78■□□□□ 0.28
SCNN1A-221ENST00000543768 C4orf33Q8N1A6 199 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms