RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 DPYSL4O14531 572 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 MYBPC2Q14324 1141 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 CRNNQ9UBG3 495 aaPredicted RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 GTF3C4Q9UKN8 822 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 AQP5P55064 265 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 LRRC34Q8IZ02 419 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 VPS26AO75436 327 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 HK2P52789 917 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 ALDH6A1Q02252 535 aaKnown RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 C11orf63Q6NUN7 778 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 TUBE1Q9UJT0 475 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 FLT3P36888 993 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 RAB25P57735 213 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 NAA20P61599 178 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 ROR2Q01974 943 aaKnown RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 NFIL3Q16649 462 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 ASB2Q96Q27 587 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 MOSPD1Q9UJG1 213 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 F5H423 210 aaPredicted RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 PABPC1P11940 636 aaKnown RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 NAA30Q147X3 362 aaPredicted RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 SF3B3Q15393 1217 aaKnown RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 NOA1Q8NC60 698 aaKnown RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 C17orf75Q9HAS0 396 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 CCDC28BQ9BUN5 200 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 SPASTQ9UBP0 616 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 MYL4P12829 197 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 ATG16L2Q8NAA4 619 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 KLHL11Q9NVR0 708 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 PLAGL2Q9UPG8 496 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 MADDQ8WXG6 1647 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 CCNG1P51959 295 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 NAB1Q13506 487 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 AMER2Q8N7J2 671 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 ING4Q9UNL4 249 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 SHOC2Q9UQ13 582 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 RPS6KL1Q9Y6S9 549 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 DYRK3O43781 588 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 RPS6KA5O75582 802 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 RARBP10826 455 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 AKR1B1P15121 316 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 TMEM120AQ9BXJ8 343 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 MPOP05164 745 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 CYP2C8P10632 490 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 ADGRF4Q8IZF3 695 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 GANQ9H2C0 597 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 TGM3Q08188 693 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 NFX1Q12986 1120 aaKnown RBP19.97■□□□□ 0.79
HDAC4-215ENST00000543185 SLC20A1Q8WUM9 679 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 CPA5Q8WXQ8 436 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■■■■■ 38.2
HDAC4-215ENST00000543185 SNAP91O60641 907 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 GALNTL6Q49A17 601 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 MZT2AQ6P582 158 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 SPON2Q9BUD6 331 aa19.97■□□□□ 0.79
HDAC4-215ENST00000543185 MYL12BO14950 172 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 ALDH1A2O94788 518 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 ACLYP53396 1101 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 CSE1LP55060 971 aaKnown RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 TIGD7Q6NT04 549 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 SPATA2LQ8IUW3 424 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 TBC1D10CQ8IV04 446 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 C1orf131Q8NDD1 294 aaKnown RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 TOP3AQ13472 1001 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 SNX30Q5VWJ9 437 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 SLC13A5Q86YT5 568 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 USP33Q8TEY7 942 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 STK32AQ8WU08 396 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 ALG6Q9Y672 507 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 KLHL18O94889 574 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 ALOX15P16050 662 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 SH3BP5LQ7L8J4 393 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 OR7A2PQ8NGA2 310 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 CCDC59Q9P031 241 aaKnown RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 GABBR1Q9UBS5 961 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 V9GYQ6 96 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 GUCY1B2O75343 617 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 GPD1P21695 349 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 TMEM26Q6ZUK4 368 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 DEFB107AQ8IZN7 70 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 RPL26L1Q9UNX3 145 aaKnown RBP19.96■□□□□ 0.79
HDAC4-215ENST00000543185 SAGE2PA6NJ88 616 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 MAGEB2O15479 319 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 GZMAP12544 262 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 ERFP50548 548 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 LIN54Q6MZP7 749 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 ARHGEF19Q8IW93 802 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 CYP39A1Q9NYL5 469 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 PIK3CDO00329 1044 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 CYP2D6P10635 497 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 CCDC130P13994 396 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 ACAD9Q9H845 621 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 RCVRNP35243 200 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 GSTA3Q16772 222 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 FAM71DQ8N9W8 422 aa19.96■□□□□ 0.79
HDAC4-215ENST00000543185 RPS7P62081 194 aaKnown RBP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 EXTL3O43909 919 aa19.95■□□□□ 0.78
HDAC4-215ENST00000543185 LSM8O95777 96 aaKnown RBP19.95■□□□□ 0.78
HDAC4-215ENST00000543185 RBP3P10745 1247 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms