RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 TRIM49CP0CI26 452 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 CCDC192P0DO97 292 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 MBL2P11226 248 aaPredicted RBP12.79□□□□□ -0.36
PTPN6-220ENST00000543115 SDHBP21912 280 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 SLC6A11P48066 632 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 VAMP7P51809 220 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 NDST1P52848 882 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 SEC13P55735 322 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 DHCR24Q15392 516 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 RHBDF2Q6PJF5 856 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 C12orf40Q86WS4 652 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 C12orf29Q8N999 325 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 PDZD8Q8NEN9 1154 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 SLC2A14Q8TDB8 520 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 USP33Q8TEY7 942 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 WBP2Q969T9 261 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 SMARCD1Q96GM5 515 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 TWNKQ96RR1 684 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 RTKNQ9BST9 563 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 ARRDC1-AS1Q9H2J1 176 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 GMIPQ9P107 970 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 ZNF638Q14966 1978 aaKnown RBP12.79□□□□□ -0.36
PTPN6-220ENST00000543115 ATP8B3O60423 1300 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 FAM92AA1XBS5 289 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 IKBKBO14920 756 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 DCLK1O15075 740 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 CALUO43852 315 aaPredicted RBP12.78□□□□□ -0.36
PTPN6-220ENST00000543115 ZDHHC11BP0C7U3 371 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
PTPN6-220ENST00000543115 NR2F2P24468 414 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 PIK3CAP42336 1068 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 PPP3CAQ08209 521 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 SF3A2Q15428 464 aaKnown RBP12.78□□□□□ -0.36
PTPN6-220ENST00000543115 C2orf27AQ580R0 203 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 SNX30Q5VWJ9 437 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 KRBA2Q6ZNG9 492 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 CACNA2D4Q7Z3S7 1137 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 CRYBG2Q8N1P7 616 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 KIAA1958Q8N8K9 716 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 NETO1Q8TDF5 533 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 OVCA2Q8WZ82 227 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 ACDQ96AP0 544 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 APOBEC3GQ9HC16 384 aaKnown RBP12.78□□□□□ -0.36
PTPN6-220ENST00000543115 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 CSNK1G1Q9HCP0 422 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 RXFP3Q9NSD7 469 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 FAM49BQ9NUQ9 324 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 FRMD4BQ9Y2L6 1034 aa12.78□□□□□ -0.36
PTPN6-220ENST00000543115 KIAA1549LQ6ZVL6 1849 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 A0A1W2PQ27 194 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 A0A1W2PQ64 194 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 A0A1W2PQD8 194 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 SLC9A3R1O14745 358 aaPredicted RBP12.77□□□□□ -0.37
PTPN6-220ENST00000543115 SLC30A4O14863 429 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 MAPK13O15264 365 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 EPN2O95208 641 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 APBB3O95704 486 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 P4HA1P13674 534 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTPN6-220ENST00000543115 ADORA2BP29275 332 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 GCLMP48507 274 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 NFIL3Q16649 462 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 PLK5Q496M5 336 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 ZCWPW2Q504Y3 356 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 HECTD3Q5T447 861 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 GPRIN1Q7Z2K8 1008 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 UNC93AQ86WB7 457 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 CCDC33Q8N5R6 958 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 TAS1R2Q8TE23 839 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 TAF4BQ92750 862 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 LOXL4Q96JB6 756 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 ZC3H10Q96K80 434 aaKnown RBP12.77□□□□□ -0.37
PTPN6-220ENST00000543115 DUSP15Q9H1R2 295 aaPredicted RBP12.77□□□□□ -0.37
PTPN6-220ENST00000543115 SMOC1Q9H4F8 434 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 EBF1Q9UH73 591 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 INVSQ9Y283 1065 aa12.77□□□□□ -0.37
PTPN6-220ENST00000543115 E2F8A0AVK6 867 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 HHLA1C9JL84 531 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 ZNF202O95125 648 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 ADH5P11766 374 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 TUBP50607 506 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 DGKEP52429 567 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 INCA1Q0VD86 236 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 PLA2G2CQ5R387 149 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 LY6G5CQ5SRR4 150 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 EMC10Q5UCC4 262 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 CLEC20AQ6ZU45 233 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 INTS8Q75QN2 995 aaKnown RBP12.76□□□□□ -0.37
PTPN6-220ENST00000543115 DDX42Q86XP3 938 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPN6-220ENST00000543115 BBS7Q8IWZ6 715 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 FAM186BQ8IYM0 893 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 SMYD4Q8IYR2 804 aaPredicted RBP12.76□□□□□ -0.37
PTPN6-220ENST00000543115 PHTF2Q8N3S3 785 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 GUF1Q8N442 669 aaKnown RBP12.76□□□□□ -0.37
PTPN6-220ENST00000543115 TSTD1Q8NFU3 115 aa12.76□□□□□ -0.37
PTPN6-220ENST00000543115 WHAMMQ8TF30 809 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms