RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SLC4A8Q2Y0W8 1093 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 LRRC23Q53EV4 343 aaPredicted RBP6.4□□□□□ -1.38
XRCC4-206ENST00000542685 STRIP1Q5VSL9 837 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 NUGGCQ68CJ6 796 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 ARMC6Q6NXE6 501 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 MTHFD1LQ6UB35 978 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 UBE3BQ7Z3V4 1068 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 MYLK4Q86YV6 388 aaPredicted RBP6.4□□□□□ -1.38
XRCC4-206ENST00000542685 FAM114A1Q8IWE2 563 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 SLC44A3Q8N4M1 653 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 C3orf20Q8ND61 904 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 CNNM3Q8NE01 707 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 TRIM58Q8NG06 486 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 B4GALNT2Q8NHY0 566 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 SMCR8Q8TEV9 937 aaPredicted RBP6.4□□□□□ -1.38
XRCC4-206ENST00000542685 RNF31Q96EP0 1072 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 FAM126AQ9BYI3 521 aaPredicted RBP6.4□□□□□ -1.38
XRCC4-206ENST00000542685 TRIM5Q9C035 493 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 TESQ9UGI8 421 aaKnown RBP6.4□□□□□ -1.38
XRCC4-206ENST00000542685 SLC23A1Q9UHI7 598 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 RUVBL1Q9Y265 456 aaKnown RBP6.4□□□□□ -1.38
XRCC4-206ENST00000542685 FRMD4BQ9Y2L6 1034 aa6.4□□□□□ -1.38
XRCC4-206ENST00000542685 MSH6P52701 1360 aa6.4□□□□□ -1.39
XRCC4-206ENST00000542685 CPS1P31327 1500 aa6.4□□□□□ -1.39
XRCC4-206ENST00000542685 H3BQF6 201 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 PRSS23O95084 383 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 SLC6A9P48067 706 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 EVCP57679 992 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 KIAA0753Q2KHM9 967 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 RNF219Q5W0B1 726 aaPredicted RBP6.39□□□□□ -1.39
XRCC4-206ENST00000542685 B3GNTL1Q67FW5 361 aaPredicted RBP6.39□□□□□ -1.39
XRCC4-206ENST00000542685 OTUD7BQ6GQQ9 843 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 CAPRIN2Q6IMN6 1127 aaKnown RBP6.39□□□□□ -1.39
XRCC4-206ENST00000542685 ZNF280DQ6N043 979 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 CRELD2Q6UXH1 353 aaPredicted RBP6.39□□□□□ -1.39
XRCC4-206ENST00000542685 RNF168Q8IYW5 571 aaPredicted RBP6.39□□□□□ -1.39
XRCC4-206ENST00000542685 MSANTD4Q8NCY6 345 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 OR2I1PQ8NGU4 316 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.39□□□□□ -1.39
XRCC4-206ENST00000542685 RBM17Q96I25 401 aaKnown RBP6.39□□□□□ -1.39
XRCC4-206ENST00000542685 RNPEPQ9H4A4 650 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 VCPKMTQ9H867 229 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 KLC4Q9NSK0 619 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 FBXO34Q9NWN3 711 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 SWAP70Q9UH65 585 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 NPHP3Q7Z494 1330 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 SALL3Q9BXA9 1300 aa6.39□□□□□ -1.39
XRCC4-206ENST00000542685 CCDC78A2IDD5 438 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 ENO4A6NNW6 628 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 IPO5O00410 1097 aaKnown RBP6.38□□□□□ -1.39
XRCC4-206ENST00000542685 FYB1O15117 783 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 AP5Z1O43299 807 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 ZSCAN12O43309 604 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 GPR32O75388 356 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 RASSF9O75901 435 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 FGFR4P22455 802 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 ERVK-21P61565 698 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 BLOC1S1P78537 153 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 HSD11B2P80365 405 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 LRMPQ12912 555 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 CUL3Q13618 768 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 PKP1Q13835 747 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 KBTBD12Q3ZCT8 623 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 VPS53Q5VIR6 699 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 GPR149Q86SP6 731 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 MYOCDQ8IZQ8 938 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 PPM1NQ8N819 430 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 PARD3BQ8TEW8 1205 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 CASKIN2Q8WXE0 1202 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 DPF2Q92785 391 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 SPDL1Q96EA4 605 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 PPP1R13BQ96KQ4 1090 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 CCDC114Q96M63 670 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 ARPC5LQ9BPX5 153 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 NAT10Q9H0A0 1025 aaKnown RBP6.38□□□□□ -1.39
XRCC4-206ENST00000542685 NUP62CLQ9H1M0 184 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 UNC45AQ9H3U1 944 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 KIF9Q9HAQ2 790 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 TUBA8Q9NY65 449 aaPredicted RBP6.38□□□□□ -1.39
XRCC4-206ENST00000542685 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.38□□□□□ -1.39
XRCC4-206ENST00000542685 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 GPR45Q9Y5Y3 372 aa6.38□□□□□ -1.39
XRCC4-206ENST00000542685 CEP170BQ9Y4F5 1589 aaPredicted RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 TECPR2O15040 1411 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CCDC69A6NI79 296 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 FAM171A2A8MVW0 826 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 TMEM232C9JQI7 657 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 TEX33O43247 280 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 TPD52L2O43399 206 aaKnown RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CEP104O60308 925 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 HMMRO75330 724 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 GPANK1O95872 356 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 PENKP01210 267 aaPredicted RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 MYL1P05976 194 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 IDO1P14902 403 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 ZFXP17010 805 aaPredicted RBP6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CXCR5P32302 372 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 TRPC1P48995 793 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 AMPHP49418 695 aa6.37□□□□□ -1.39
XRCC4-206ENST00000542685 CLK3P49761 638 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms