RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 PCDHGC5Q9Y5F6 944 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 MORC2Q9Y6X9 1032 aaPredicted RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 A0A0G2JND7 137 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 ABCG1P45844 678 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 RPL21P46778 160 aaKnown RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 RTP1P59025 263 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 CRADDP78560 199 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 MCL1Q07820 350 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 C6orf118Q5T5N4 469 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 C11orf63Q6NUN7 778 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 TAPT1Q6NXT6 567 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 TSHZ1Q6ZSZ6 1077 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 SLFN11Q7Z7L1 901 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 TSEN2Q8NCE0 465 aaKnown RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 SLITRK1Q96PX8 696 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 CYP3A43Q9HB55 503 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 RNF186Q9NXI6 227 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 BFARQ9NZS9 450 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 ZC3H7BQ9UGR2 993 aaKnown RBP10.57□□□□□ -0.72
TOP3A-208ENST00000542570 NWD2Q9ULI1 1742 aa10.57□□□□□ -0.72
TOP3A-208ENST00000542570 MDM4O15151 490 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 PJA2O43164 708 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 SEPT4O43236 478 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 HMGCRP04035 888 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 H2AFXP16104 143 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 HNRNPH3P31942 346 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 C1QBPQ07021 282 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ANO4Q32M45 955 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 COBLL1Q53SF7 1204 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 MROH9Q5TGP6 573 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ZNF449Q6P9G9 518 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CACUL1Q86Y37 369 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 DCP1BQ8IZD4 617 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 TTC30BQ8N4P2 665 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 B3GALNT2Q8NCR0 500 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CERS4Q9HA82 394 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ZNF446Q9NWS9 450 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 MARCOQ9UEW3 520 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ZC3H4Q9UPT8 1303 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CCDC88AQ3V6T2 1871 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 MYH6P13533 1939 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 UBA6A0AVT1 1052 aaPredicted RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ACRP10323 421 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 PMF1Q6P1K2 205 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CD302Q8IX05 232 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CLEC4CQ8WTT0 213 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 TRIB2Q92519 343 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 TACO1Q9BSH4 297 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 TRAIPQ9BWF2 469 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ZNF518BQ9C0D4 1074 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ISCUQ9H1K1 167 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 KLHL14Q9P2G3 628 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 BAIAP2L1Q9UHR4 511 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 TLK1Q9UKI8 766 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 TPX2Q9ULW0 747 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 R3HDM2Q9Y2K5 976 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 TARSL2A2RTX5 802 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CNMDO75829 334 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CHRNB2P17787 502 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ATICP31939 592 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ALDH1A3P47895 512 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 GCNAQ96QF7 691 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 SFMBT1Q9UHJ3 866 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CAPN7Q9Y6W3 813 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 MYBPHLA2RUH7 354 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ATP8B1O43520 1251 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 TCF4P15884 667 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CYP2C18P33260 490 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 IL9RQ01113 521 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ZNF235Q14590 738 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 C9orf57Q5W0N0 161 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 CCDC62Q6P9F0 684 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 BZW1Q7L1Q6 419 aaKnown RBP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 GSDMBQ8TAX9 411 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 GANCQ8TET4 914 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 IFT43Q96FT9 208 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 ATP6V1G3Q96LB4 118 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 RMDN2Q96LZ7 410 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 FIZ1Q96SL8 496 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 COLEC11Q9BWP8 271 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 FZD8Q9H461 694 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.56□□□□□ -0.72
TOP3A-208ENST00000542570 FLRT1Q9NZU1 646 aa10.56□□□□□ -0.72
TOP3A-208ENST00000542570 GIPC1O14908 333 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 ERBB2P04626 1255 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 CD48P09326 243 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 CYP2F1P24903 491 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 SSTR1P30872 391 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 HNRNPH2P55795 449 aaKnown RBP10.55□□□□□ -0.72
TOP3A-208ENST00000542570 CCNYL1Q8N7R7 359 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 PRELID2Q8N945 189 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 MAML1Q92585 1016 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 VANGL2Q9ULK5 521 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 PCDHA3Q9Y5H8 950 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 CITO14578 2027 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 A8MX80 341 aa10.55□□□□□ -0.72
TOP3A-208ENST00000542570 FOXO6A8MYZ6 492 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms