RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 INCA1Q0VD86 236 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 IFRD2Q12894 506 aaPredicted RBP12.07□□□□□ -0.48
VTN-203ENST00000542029 BECN1Q14457 450 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 DHCR24Q15392 516 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 HSF5Q4G112 596 aaPredicted RBP12.07□□□□□ -0.48
VTN-203ENST00000542029 PAQR9Q6ZVX9 377 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 FILIP1Q7Z7B0 1213 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 C11orf74Q86VG3 221 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 FANCMQ8IYD8 2048 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 FAM186BQ8IYM0 893 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
VTN-203ENST00000542029 RPLP0P6Q8NHW5 317 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 NT5C1AQ9BXI3 368 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 NACA2Q9H009 215 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 SDCBP2Q9H190 292 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 FAM124BQ9H5Z6 455 aaPredicted RBP12.07□□□□□ -0.48
VTN-203ENST00000542029 CSNK1G1Q9HCP0 422 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 PNPLA8Q9NP80 782 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 SEMA4GQ9NTN9 838 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 TMEM30AQ9NV96 361 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 RMND1Q9NWS8 449 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 SMPD4Q9NXE4 827 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 CFAP97Q9P2B7 532 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 SH3BP1Q9Y3L3 701 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 PCDHGA5Q9Y5G8 931 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 ZNF292O60281 2723 aa12.07□□□□□ -0.48
VTN-203ENST00000542029 CETN3O15182 167 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 COCHO43405 550 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 OPRD1P41143 372 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 ASPAP45381 313 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 GCLMP48507 274 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 MCCD1P59942 119 aaPredicted RBP12.06□□□□□ -0.48
VTN-203ENST00000542029 MRPS21P82921 87 aaKnown RBP12.06□□□□□ -0.48
VTN-203ENST00000542029 ZXDBP98169 803 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 GOLGA8FQ08AF8 430 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 GOLGA8DPQ0D2H9 430 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 DMC1Q14565 340 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 KRT39Q6A163 491 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 PKN3Q6P5Z2 889 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 NUDT18Q6ZVK8 323 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 SCAMP5Q8TAC9 235 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 SLC2A14Q8TDB8 520 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 USP33Q8TEY7 942 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 PNKPQ96T60 521 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 HNRNPABQ99729 332 aaKnown RBP12.06□□□□□ -0.48
VTN-203ENST00000542029 NIF3L1Q9GZT8 377 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 TMEM8AQ9HCN3 771 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 PARD6AQ9NPB6 346 aa12.06□□□□□ -0.48
VTN-203ENST00000542029 TLR8Q9NR97 1041 aaKnown RBP12.06□□□□□ -0.48
VTN-203ENST00000542029 CHORDC1Q9UHD1 332 aaPredicted RBP12.06□□□□□ -0.48
VTN-203ENST00000542029 TICRRQ7Z2Z1 1910 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 A0A0A0MRY4 1105 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 APODP05090 189 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 CYP17A1P05093 508 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 EPB41P11171 864 aaKnown RBP12.05□□□□□ -0.48
VTN-203ENST00000542029 CCDC130P13994 396 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 GRIA2P42262 883 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 ATXN1P54253 815 aaKnown RBP12.05□□□□□ -0.48
VTN-203ENST00000542029 MAP3K7CLP57077 242 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 NUCB2P80303 420 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 GAD2Q05329 585 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 SRSF5Q13243 272 aaKnown RBP12.05□□□□□ -0.48
VTN-203ENST00000542029 ELF2Q15723 593 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 ZCWPW2Q504Y3 356 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 C1orf220Q5T0J3 134 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 BTBD8Q5XKL5 378 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 PRR23CQ6ZRP0 262 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 TADA2BQ86TJ2 420 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 TSTD1Q8NFU3 115 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 KCNV2Q8TDN2 545 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 TAS1R2Q8TE23 839 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 CYFIP2Q96F07 1278 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 ZC3H10Q96K80 434 aaKnown RBP12.05□□□□□ -0.48
VTN-203ENST00000542029 HHIPQ96QV1 700 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 SMOQ99835 787 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 GMIPQ9P107 970 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 HOOK1Q9UJC3 728 aaKnown RBP12.05□□□□□ -0.48
VTN-203ENST00000542029 MAPK8IP1Q9UQF2 711 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 PCDHA5Q9Y5H7 936 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 GTF3C3Q9Y5Q9 886 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 NUP210Q8TEM1 1887 aaPredicted RBP12.05□□□□□ -0.48
VTN-203ENST00000542029 CACNA1AO00555 2505 aa12.05□□□□□ -0.48
VTN-203ENST00000542029 PATJQ8NI35 1801 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 SLC30A4O14863 429 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 TLR5O60602 858 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 CILPO75339 1184 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 ALDH1A2O94788 518 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 RHOBTB1O94844 696 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 EPN2O95208 641 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 SMC2O95347 1197 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 ADH5P11766 374 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 PXNP49023 591 aaPredicted RBP12.04□□□□□ -0.48
VTN-203ENST00000542029 PSEN1P49768 467 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 DGKEP52429 567 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 PPP3CAQ08209 521 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 USP39Q53GS9 565 aaKnown RBP12.04□□□□□ -0.48
VTN-203ENST00000542029 COBLL1Q53SF7 1204 aa12.04□□□□□ -0.48
VTN-203ENST00000542029 NAIF1Q69YI7 327 aaPredicted RBP12.04□□□□□ -0.48
VTN-203ENST00000542029 SPOPLQ6IQ16 392 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms