RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 UBXN6Q9BZV1 441 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 MFSD1Q9H3U5 465 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 HPS4Q9NQG7 708 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 COMMD8Q9NX08 183 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 DLGAP2Q9P1A6 1054 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 TSPAN16Q9UKR8 245 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 SCML2Q9UQR0 700 aa10.28□□□□□ -0.76
YBX3-212ENST00000542002 PTPRDP23468 1912 aa10.27□□□□□ -0.76
YBX3-212ENST00000542002 A0A1W2PQH9 124 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 KANSL1LA0AUZ9 987 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 GTPBP10A4D1E9 387 aaKnown RBP10.27□□□□□ -0.77
YBX3-212ENST00000542002 LEFTY2O00292 366 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 STK25O00506 426 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 SCAMP3O14828 347 aaKnown RBP10.27□□□□□ -0.77
YBX3-212ENST00000542002 CKMP06732 381 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 DCNP07585 359 aaKnown RBP10.27□□□□□ -0.77
YBX3-212ENST00000542002 PAEPP09466 180 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 VDRP11473 427 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
YBX3-212ENST00000542002 ARSAP15289 507 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 CD19P15391 556 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 BRD2P25440 801 aaKnown RBP10.27□□□□□ -0.77
YBX3-212ENST00000542002 SLC7A9P82251 487 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 PFKPQ01813 784 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 KRT31Q15323 416 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 CNGA2Q16280 664 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 STX1AQ16623 288 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 EXOC3L4Q17RC7 722 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 SGO2Q562F6 1265 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 PMF1Q6P1K2 205 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 TXNDC11Q6PKC3 985 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 LCLAT1Q6UWP7 414 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 TPRG1Q6ZUI0 275 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 BHLHA9Q7RTU4 235 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 APTXQ7Z2E3 356 aaKnown RBP10.27□□□□□ -0.77
YBX3-212ENST00000542002 SUGP1Q8IWZ8 645 aaKnown RBP10.27□□□□□ -0.77
YBX3-212ENST00000542002 YAF2Q8IY57 180 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 RBBP8NLQ8NC74 664 aaPredicted RBP10.27□□□□□ -0.77
YBX3-212ENST00000542002 TTC16Q8NEE8 873 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 PRSS33Q8NF86 280 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 SLC35F5Q8WV83 523 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 OVCA2Q8WZ82 227 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 DNASE1L2Q92874 299 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 SLITRK1Q96PX8 696 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 FUCA2Q9BTY2 467 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 EBF3Q9H4W6 596 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 ANO10Q9NW15 660 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 SMPD4Q9NXE4 827 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 TAB2Q9NYJ8 693 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 EHD2Q9NZN4 543 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 ZMYM5Q9UJ78 669 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 NUDT5Q9UKK9 219 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 KIAA1257Q9ULG3 409 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 ARHGAP26Q9UNA1 814 aa10.27□□□□□ -0.77
YBX3-212ENST00000542002 LRRC10BA6NIK2 292 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 FAM170BA6NMN3 283 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 FOXN3O00409 490 aaPredicted RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 GREM1O60565 184 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 PNMA6AP0CW24 399 aaPredicted RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 ZNF18P17022 549 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 TARSP26639 723 aaKnown RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 EEF1GP26641 437 aaKnown RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 KLK7P49862 253 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 YWHAEP62258 255 aaKnown RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 PRKCQQ04759 706 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 TCF15Q12870 199 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 ARHGAP44Q17R89 818 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 ANO6Q4KMQ2 910 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 ARHGAP29Q52LW3 1261 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 HECTD3Q5T447 861 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 NAIF1Q69YI7 327 aaPredicted RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 DENND1BQ6P3S1 775 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 FAM114A1Q8IWE2 563 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 DHX40Q8IX18 779 aaKnown RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 CCDC105Q8IYK2 499 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 PJA1Q8NG27 643 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 NAA15Q9BXJ9 866 aaKnown RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 VPS16Q9H269 839 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 FBXO44Q9H4M3 255 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 FBRSL1Q9HCM7 1045 aaKnown RBP10.26□□□□□ -0.77
YBX3-212ENST00000542002 PNPLA8Q9NP80 782 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 APEX2Q9UBZ4 518 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 DNAJC12Q9UKB3 198 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.26□□□□□ -0.77
YBX3-212ENST00000542002 SIT1Q9Y3P8 196 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 CPQQ9Y646 472 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 WNT6Q9Y6F9 365 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 PIAS3Q9Y6X2 628 aa10.26□□□□□ -0.77
YBX3-212ENST00000542002 GREB1Q4ZG55 1949 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 PIK3R2O00459 728 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 XPO1O14980 1071 aaKnown RBP10.25□□□□□ -0.77
YBX3-212ENST00000542002 MDM4O15151 490 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 MBL2P11226 248 aaPredicted RBP10.25□□□□□ -0.77
YBX3-212ENST00000542002 ATP1A3P13637 1013 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 KRT5P13647 590 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 TCF3P15923 654 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 PFKLP17858 780 aa10.25□□□□□ -0.77
YBX3-212ENST00000542002 TRIM21P19474 475 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms