RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ZWINTO95229 277 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 VDRP11473 427 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 GTF2A2P52657 109 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 ELF3P78545 371 aaPredicted RBP16.72■□□□□ 0.27
VARS2-212ENST00000542001 GNASQ5JWF2 1037 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 CATSPERGQ6ZRH7 1159 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 DNAJB3Q8WWF6 145 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 TFAP2BQ92481 460 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 MBOAT7Q96N66 472 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 TRIM56Q9BRZ2 755 aaKnown RBP16.72■□□□□ 0.27
VARS2-212ENST00000542001 CDT1Q9H211 546 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 KDM4CQ9H3R0 1056 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 FAM8A1Q9UBU6 413 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 RPTORQ8N122 1335 aa16.72■□□□□ 0.27
VARS2-212ENST00000542001 MYO9BQ13459 2157 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 UBA6A0AVT1 1052 aaPredicted RBP16.71■□□□□ 0.27
VARS2-212ENST00000542001 ACKR2O00590 384 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 GMNNO75496 209 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 KDELR1P24390 212 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 STIP1P31948 543 aaKnown RBP16.71■□□□□ 0.27
VARS2-212ENST00000542001 ETFBP38117 255 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 ZDHHC24Q6UX98 284 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 MSL3Q8N5Y2 521 aaKnown RBP16.71■□□□□ 0.27
VARS2-212ENST00000542001 CDCA5Q96FF9 252 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 CPXM1Q96SM3 734 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 NDE1Q9NXR1 346 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 CPA4Q9UI42 421 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 MAGEB2O15479 319 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 CYP2F1P24903 491 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 TGFB2P61812 414 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 KIF19Q2TAC6 998 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 MFSD14AQ96MC6 490 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 UBXN6Q9BZV1 441 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 ZCWPW1Q9H0M4 648 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 FBXO6Q9NRD1 293 aaPredicted RBP16.71■□□□□ 0.27
VARS2-212ENST00000542001 DLGAP2Q9P1A6 1054 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 CPSF3Q9UKF6 684 aaKnown RBP16.71■□□□□ 0.27
VARS2-212ENST00000542001 DHX15O43143 795 aaKnown RBP16.71■□□□□ 0.27
VARS2-212ENST00000542001 JCHAINP01591 159 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 ITIH4Q14624 930 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 TMEM259Q4ZIN3 620 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 KCNT2Q6UVM3 1135 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 SLFN11Q7Z7L1 901 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 SLC2A14Q8TDB8 520 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 TRIM4Q9C037 500 aa16.71■□□□□ 0.27
VARS2-212ENST00000542001 TULP2O00295 520 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 ENTPD5O75356 428 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 KCNA2P16389 499 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 RBBP5Q15291 538 aaKnown RBP16.7■□□□□ 0.26
VARS2-212ENST00000542001 IFNEQ86WN2 208 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 KATNAL2Q8IYT4 538 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 NSL1Q96IY1 281 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 MROH7Q68CQ1 1323 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 CASTOR2A6NHX0 329 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 ASAP2O43150 1006 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 TSPAN3O60637 253 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 RABGGTBP53611 331 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 MCL1Q07820 350 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 SH3PXD2AQ5TCZ1 1133 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 ABHD15Q6UXT9 468 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 AGGF1Q8N302 714 aaeCLIP16.7■□□□□ 0.26
VARS2-212ENST00000542001 C3orf20Q8ND61 904 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 LRRC4CQ9HCJ2 640 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 CYP4F12Q9HCS2 524 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 SLC17A7Q9P2U7 560 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 CICQ96RK0 1608 aaPredicted RBP16.7■□□□□ 0.26
VARS2-212ENST00000542001 NUP98P52948 1817 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 PLIN4Q96Q06 1357 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 E9PBE3 544 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 KLHL41O60662 606 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 FSBPO95073 299 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 NUDT17P0C025 328 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 GRIK1P39086 918 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 PTGIRP43119 386 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 KCNV1Q6PIU1 500 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 ERO1BQ86YB8 467 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 GABPB2Q8TAK5 448 aaPredicted RBP16.7■□□□□ 0.26
VARS2-212ENST00000542001 CKAP2Q8WWK9 683 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 LPIN3Q9BQK8 851 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 IL1RL2Q9HB29 575 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 GOLGA2P5Q9HBQ8 144 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 RXFP1Q9HBX9 757 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 ANGPTL2Q9UKU9 493 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
VARS2-212ENST00000542001 WDR27A2RRH5 827 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 SPTLC1O15269 473 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 KRT16P08779 473 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 MMP13P45452 471 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 SP2Q02086 613 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 ADIGQ0VDE8 80 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 SNAPC2Q13487 334 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 DPYSL3Q14195 570 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 TTC39BQ5VTQ0 682 aaPredicted RBP16.7■□□□□ 0.26
VARS2-212ENST00000542001 ANKRD22Q5VYY1 191 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 BTBD8Q5XKL5 378 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 ZCCHC9Q8N567 271 aaKnown RBP16.7■□□□□ 0.26
VARS2-212ENST00000542001 DNAJC16Q9Y2G8 782 aa16.7■□□□□ 0.26
VARS2-212ENST00000542001 A0A0B4J269 797 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms