RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 PHTF2Q8N3S3 785 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 GUF1Q8N442 669 aaKnown RBP12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 CAMKK1Q8N5S9 505 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 RPLP0P6Q8NHW5 317 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 SLC2A14Q8TDB8 520 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 TAS1R2Q8TE23 839 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 USP33Q8TEY7 942 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 GAB3Q8WWW8 586 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 OVCA2Q8WZ82 227 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 ZC3H10Q96K80 434 aaKnown RBP12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 TNIP3Q96KP6 325 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 SCAND2PQ9GZW5 306 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 CCSER2Q9H7U1 834 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 SEMA4GQ9NTN9 838 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 COMMD8Q9NX08 183 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 CFAP97Q9P2B7 532 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 GMEB2Q9UKD1 530 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 SPTBN2O15020 2390 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 NCOR2Q9Y618 2525 aa12.53□□□□□ -0.4
CLSTN3-211ENST00000541667 PRR5-ARHGAP8B1AHC4 643 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 CALUO43852 315 aaPredicted RBP12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 NFATC1O95644 943 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 ABL1P00519 1130 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 TRIM49P0CI25 452 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 TRIM49CP0CI26 452 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 HNRNPLP14866 589 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 NR2F2P24468 414 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 GCLMP48507 274 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 SLC5A3P53794 718 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 ARHGAP8P85298 464 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 LMNB2Q03252 620 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 NR1H3Q13133 447 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 GPRIN1Q7Z2K8 1008 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 KBTBD6Q86V97 674 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 C12orf40Q86WS4 652 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 FMR1NBQ8N0W7 255 aaPredicted RBP12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 SEMA4DQ92854 862 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 SMARCD1Q96GM5 515 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 SLITRK1Q96PX8 696 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 HNRNPABQ99729 332 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 DUSP9Q99956 384 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 DMAP1Q9NPF5 467 aaPredicted RBP12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 OSER1Q9NX31 292 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 EBF1Q9UH73 591 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 RAB23Q9ULC3 237 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 USP18Q9UMW8 372 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 SLC8A2Q9UPR5 921 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 FRMD4BQ9Y2L6 1034 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 KIAA1549LQ6ZVL6 1849 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 SPAG17Q6Q759 2223 aa12.52□□□□□ -0.41
CLSTN3-211ENST00000541667 RALGAPA1Q6GYQ0 2036 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 E2F8A0AVK6 867 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 AXIN1O15169 862 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 GDF9O60383 454 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 AP1G2O75843 785 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 TBX18O95935 607 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 MBL2P11226 248 aaPredicted RBP12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 TUBP50607 506 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 MAP3K7CLP57077 242 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 IFRD2Q12894 506 aaPredicted RBP12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 ADAM9Q13443 819 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 DMC1Q14565 340 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 PLA2G2CQ5R387 149 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 EMC10Q5UCC4 262 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 PRR23CQ6ZRP0 262 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 INTS8Q75QN2 995 aaKnown RBP12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 ABCA7Q8IZY2 2146 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 PDZD8Q8NEN9 1154 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 ENGASEQ8NFI3 743 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 FBXO32Q969P5 355 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 EEF2KMTQ96G04 330 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 LOXL4Q96JB6 756 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 HHIPQ96QV1 700 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 MED10Q9BTT4 135 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 KRT82Q9NSB4 513 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 RXFP3Q9NSD7 469 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 GMIPQ9P107 970 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 HCN2Q9UL51 889 aa12.51□□□□□ -0.41
CLSTN3-211ENST00000541667 MYO18AQ92614 2054 aaKnown RBP12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 DCDC2BA2VCK2 349 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 TM4SF5O14894 197 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 DCLK1O15075 740 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 CILPO75339 1184 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 RPP40O75818 363 aaKnown RBP12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 P4HA1P13674 534 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 PSMC2P35998 433 aaKnown RBP12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 KIR2DL1P43626 348 aaPredicted RBP12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 PLK5Q496M5 336 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 LY6G5CQ5SRR4 150 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 CLEC20AQ6ZU45 233 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 CEP68Q76N32 757 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 CACNA2D4Q7Z3S7 1137 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 RASSF3Q86WH2 238 aa12.5□□□□□ -0.41
CLSTN3-211ENST00000541667 BBS7Q8IWZ6 715 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms