RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 TTC30AQ86WT1 665 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 TMEFF1Q8IYR6 380 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 FRMD1Q8N878 549 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 DEFB124Q8NES8 71 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 KCNV2Q8TDN2 545 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 RLN3Q8WXF3 142 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 OVCA2Q8WZ82 227 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 ELOVL4Q9GZR5 314 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 ARHGEF4Q9NR80 690 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 SMPD4Q9NXE4 827 aa13.93□□□□□ -0.18
SCARB1-207ENST00000541661 MYO18AQ92614 2054 aaKnown RBP13.93□□□□□ -0.18
SCARB1-207ENST00000541661 EIF3DO15371 548 aaKnown RBP eCLIP13.92□□□□□ -0.181e-7■□□□□ 8.6
SCARB1-207ENST00000541661 RTN3O95197 1032 aaPredicted RBP13.92□□□□□ -0.18
SCARB1-207ENST00000541661 ABL1P00519 1130 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
SCARB1-207ENST00000541661 ENGP17813 658 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 YWHAQP27348 245 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 GAD2Q05329 585 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 SNX30Q5VWJ9 437 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 FAM173BQ6P4H8 233 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 ETFBKMTQ8IXQ9 262 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 NUP93Q8N1F7 819 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 GLIS3Q8NEA6 775 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 OR6B3Q8NGW1 331 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 ZNF507Q8TCN5 953 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 HMGB4Q8WW32 186 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 ZFRQ96KR1 1074 aaKnown RBP13.92□□□□□ -0.18
SCARB1-207ENST00000541661 B3GNT5Q9BYG0 378 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 ZNF518BQ9C0D4 1074 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 SLC32A1Q9H598 525 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 IL37Q9NZH6 218 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 PILRBQ9UKJ0 227 aa13.92□□□□□ -0.18
SCARB1-207ENST00000541661 SCAMP3O14828 347 aaKnown RBP13.91□□□□□ -0.18
SCARB1-207ENST00000541661 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
SCARB1-207ENST00000541661 TGFB1I1O43294 461 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 COCHO43405 550 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 TNNI1P19237 187 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 CEBPZQ03701 1054 aaKnown RBP13.91□□□□□ -0.18
SCARB1-207ENST00000541661 SEMA3BQ13214 749 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 PSMD6Q15008 389 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 SNRNP35Q16560 246 aaKnown RBP13.91□□□□□ -0.18
SCARB1-207ENST00000541661 WDR72Q3MJ13 1102 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 PREPLQ4J6C6 727 aaPredicted RBP13.91□□□□□ -0.18
SCARB1-207ENST00000541661 LY6G5CQ5SRR4 150 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 LYSMD4Q5XG99 296 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 EPM2AIP1Q7L775 607 aaPredicted RBP13.91□□□□□ -0.18
SCARB1-207ENST00000541661 TRMT11Q7Z4G4 463 aaKnown RBP13.91□□□□□ -0.18
SCARB1-207ENST00000541661 B3GALNT2Q8NCR0 500 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 HPS3Q969F9 1004 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 LRRC27Q9C0I9 530 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 TNMDQ9H2S6 317 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 DPEP3Q9H4B8 488 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 KBTBD4Q9NVX7 518 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 BCCIPQ9P287 314 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCARB1-207ENST00000541661 STARD13Q9Y3M8 1113 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 NEUROG3Q9Y4Z2 214 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
SCARB1-207ENST00000541661 IGF2RP11717 2491 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 TCRBV21S2A2A0A5A6 115 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 FAM92AA1XBS5 289 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 A8MXQ7 604 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 CLDN5O00501 218 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 AP5Z1O43299 807 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 ZDHHC11BP0C7U3 371 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
SCARB1-207ENST00000541661 ITPKAP23677 461 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 ATICP31939 592 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 TUBP50607 506 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 SNRPFP62306 86 aaKnown RBP13.9□□□□□ -0.18
SCARB1-207ENST00000541661 TNNC1P63316 161 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 KDSRQ06136 332 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 CYP24A1Q07973 514 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 E2F4Q16254 413 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 DUOXA1Q1HG43 343 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 HECTD3Q5T447 861 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 SLC36A4Q6YBV0 504 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 ARMCX6Q7L4S7 300 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 PGBD3Q8N328 593 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 PDILTQ8N807 584 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 RDH13Q8NBN7 331 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 CEP76Q8TAP6 659 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 FBXO32Q969P5 355 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 TRIM9Q9C026 710 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-207ENST00000541661 XYLT2Q9H1B5 865 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 UPF2Q9HAU5 1272 aaKnown RBP13.9□□□□□ -0.18
SCARB1-207ENST00000541661 ZDHHC4Q9NPG8 344 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 SPHK2Q9NRA0 654 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 AGPAT3Q9NRZ7 376 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 COMMD8Q9NX08 183 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 DEC1Q9P2X7 70 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-207ENST00000541661 CIZ1Q9ULV3 898 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-207ENST00000541661 SLC6A14Q9UN76 642 aa13.9□□□□□ -0.18
SCARB1-207ENST00000541661 MSRB2Q9Y3D2 182 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms