RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PRRT4C9JH25 899 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 PLA2G6O60733 806 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 INMTO95050 263 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 MT-ND5P03915 603 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 GJB1P08034 283 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 HDCP19113 662 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 KLRC1P26715 233 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 RARRES1P49788 294 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 ANXA11P50995 505 aaKnown RBP4.87□□□□□ -1.63
SNHG1-217ENST00000541578 ITGA8P53708 1063 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 ARL4CP56559 192 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 PSMC1P62191 440 aaKnown RBP4.87□□□□□ -1.63
SNHG1-217ENST00000541578 DYRK1AQ13627 763 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 AMOTQ4VCS5 1084 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 RRAGBQ5VZM2 374 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 UNC13DQ70J99 1090 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 PRIMA1Q86XR5 153 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 FAM90A1Q86YD7 464 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 PDSS2Q86YH6 399 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 RNF152Q8N8N0 203 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 PDPRQ8NCN5 879 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 NSUN7Q8NE18 718 aaKnown RBP4.87□□□□□ -1.63
SNHG1-217ENST00000541578 DDX17Q92841 729 aaKnown RBP4.87□□□□□ -1.63
SNHG1-217ENST00000541578 USP13Q92995 863 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-217ENST00000541578 SCAMP4Q969E2 229 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 TRIM43Q96BQ3 446 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-217ENST00000541578 HEPHQ9BQS7 1158 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 DUSP26Q9BV47 211 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 TMEM120AQ9BXJ8 343 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 MAGEH1Q9H213 219 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 A1CFQ9NQ94 594 aaKnown RBP4.87□□□□□ -1.63
SNHG1-217ENST00000541578 GJB4Q9NTQ9 266 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 CTTNBP2NLQ9P2B4 639 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 FBXO2Q9UK22 296 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-217ENST00000541578 TLK1Q9UKI8 766 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 POGZQ7Z3K3 1410 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 KDM5BQ9UGL1 1544 aa4.87□□□□□ -1.63
SNHG1-217ENST00000541578 PYCARD-AS1I3L0S3 204 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 EIF3FO00303 357 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-217ENST00000541578 YY2O15391 372 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 SUN1O94901 812 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 GRPP07492 148 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 SRGNP10124 158 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 RARBP10826 455 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 XBP1P17861 261 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 FOLR3P41439 243 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 SIM1P81133 766 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-217ENST00000541578 FOXD4Q12950 439 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-217ENST00000541578 TIGD6Q17RP2 521 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 ADCK5Q3MIX3 580 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 CD300EQ496F6 205 aaPredicted RBP4.86□□□□□ -1.63
SNHG1-217ENST00000541578 EMC10Q5UCC4 262 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 TAPT1Q6NXT6 567 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 VWA1Q6PCB0 445 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 CATSPERGQ6ZRH7 1159 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 GATAD2AQ86YP4 633 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 CACNA2D3Q8IZS8 1091 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 GALNT15Q8N3T1 639 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 SLC15A4Q8N697 577 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 ACTRT2Q8TDY3 377 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 TRIB1Q96RU8 372 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 SMOQ99835 787 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 SORBS1Q9BX66 1292 aaKnown RBP4.86□□□□□ -1.63
SNHG1-217ENST00000541578 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.86□□□□□ -1.63
SNHG1-217ENST00000541578 ALG13Q9NP73 1137 aaKnown RBP4.86□□□□□ -1.63
SNHG1-217ENST00000541578 RLIMQ9NVW2 624 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 SAGE1Q9NXZ1 904 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 GRHPRQ9UBQ7 328 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 PGAP2Q9UHJ9 254 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 GPR52Q9Y2T5 361 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 TMX2Q9Y320 296 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 SCINQ9Y6U3 715 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 ARAP3Q8WWN8 1544 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 PCF11O94913 1555 aaKnown RBP4.86□□□□□ -1.63
SNHG1-217ENST00000541578 ADAMTSL3P82987 1691 aa4.86□□□□□ -1.63
SNHG1-217ENST00000541578 MBD3L4A6NDZ8 208 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-217ENST00000541578 MBD3L3A6NE82 208 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-217ENST00000541578 ZNF785A8K8V0 405 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 LGALS16A8MUM7 142 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 E7ENX8 843 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 SYT5O00445 386 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 ACKR2O00590 384 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 TRIM38O00635 465 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 TOR1BO14657 336 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 NCAM2O15394 837 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 UNC5CO95185 931 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 MATN4O95460 622 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 BDNFP23560 247 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 GATA3P23771 443 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 ELLP55199 621 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-217ENST00000541578 TAP2Q03519 686 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 CTBP1Q13363 440 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 SPARCL1Q14515 664 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 POSTNQ15063 836 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 TAF5Q15542 800 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 PREPLQ4J6C6 727 aaPredicted RBP4.85□□□□□ -1.63
SNHG1-217ENST00000541578 FBXO42Q6P3S6 717 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 KLHL17Q6TDP4 642 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 ADGRG5Q8IZF4 528 aa4.85□□□□□ -1.63
SNHG1-217ENST00000541578 DNAJC5GQ8N7S2 189 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms