RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 MEI4A8MW99 385 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 ZC3H11AO75152 810 aaKnown RBP eCLIP15.67■□□□□ 0.17e-22■■■■■ 33.3
VARS2-211ENST00000541562 LMO2P25791 158 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 GEMIN4P57678 1058 aaKnown RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 PIGHQ14442 188 aaPredicted RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 SLC10A6Q3KNW5 377 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 C3orf20Q8ND61 904 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 TMEM176AQ96HP8 235 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 LGMNQ99538 433 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 EIF2AQ9BY44 585 aaKnown RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 PSMC3IPQ9P2W1 217 aaPredicted RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 TCRBV9S1A1TA0A576 114 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 LGR5O75473 907 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 ASMTLO95671 621 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 ENO1P06733 434 aaKnown RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 AMPD1P23109 780 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 YWHAEP62258 255 aaKnown RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 MTFR1Q15390 333 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 RSPH3Q86UC2 560 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 PPP1R14CQ8TAE6 165 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 TRIP11Q15643 1979 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 H0YCG3 227 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 PAX7P23759 505 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 MAN1A1P33908 653 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 ALDH18A1P54886 795 aaKnown RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 SLC25A11Q02978 314 aaKnown RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 TRIM72Q6ZMU5 477 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 ARMC9Q7Z3E5 817 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 UTP4Q969X6 686 aaKnown RBP15.67■□□□□ 0.1
VARS2-211ENST00000541562 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
VARS2-211ENST00000541562 C10orf71Q711Q0 1435 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 LYPLA1O75608 230 aaPredicted RBP15.66■□□□□ 0.1
VARS2-211ENST00000541562 ITIH4Q14624 930 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 IER5Q5VY09 327 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 POU5F2Q8N7G0 328 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 PPP1R12CQ9BZL4 782 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 RBPJLQ9UBG7 517 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 KCNK1O00180 336 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 TMEM132DQ14C87 1099 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 ARID3BQ8IVW6 561 aaPredicted RBP15.66■□□□□ 0.1
VARS2-211ENST00000541562 AGGF1Q8N302 714 aaeCLIP15.66■□□□□ 0.1
VARS2-211ENST00000541562 STKLD1Q8NE28 680 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 RDM1Q8NG50 284 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.66■□□□□ 0.1
VARS2-211ENST00000541562 FBXO27Q8NI29 283 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 OPTNQ96CV9 577 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 COL11A1P12107 1806 aaPredicted RBP15.66■□□□□ 0.1
VARS2-211ENST00000541562 A8MXQ7 604 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 ZMPSTE24O75844 475 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 SNRPFP62306 86 aaKnown RBP15.66■□□□□ 0.1
VARS2-211ENST00000541562 TMPRSS15P98073 1019 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 PPIL6Q8IXY8 311 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 TBC1D10AQ9BXI6 508 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 ARL8BQ9NVJ2 186 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 DPP3Q9NY33 737 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 ZC3H7BQ9UGR2 993 aaKnown RBP15.66■□□□□ 0.1
VARS2-211ENST00000541562 SNX10Q9Y5X0 201 aa15.66■□□□□ 0.1
VARS2-211ENST00000541562 GM2AP17900 193 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 BNIP1Q12981 228 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 TARBP2Q15633 366 aaKnown RBP15.65■□□□□ 0.1
VARS2-211ENST00000541562 CCDC6Q16204 474 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 AZIN2Q96A70 460 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 CDCA5Q96FF9 252 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 NUDCD1Q96RS6 583 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 RXFP1Q9HBX9 757 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 ATAD5Q96QE3 1844 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 DNAJC8O75937 253 aaPredicted RBP15.65■□□□□ 0.1
VARS2-211ENST00000541562 AP1B1Q10567 949 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 LACTB2Q53H82 288 aaPredicted RBP15.65■□□□□ 0.1
VARS2-211ENST00000541562 CELF3Q5SZQ8 465 aaKnown RBP15.65■□□□□ 0.1
VARS2-211ENST00000541562 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 NXF3Q9H4D5 531 aaKnown RBP15.65■□□□□ 0.1
VARS2-211ENST00000541562 ZNF358Q9NW07 568 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 PPARGC1AQ9UBK2 798 aaKnown RBP15.65■□□□□ 0.1
VARS2-211ENST00000541562 RBBP6Q7Z6E9 1792 aaKnown RBP15.65■□□□□ 0.1
VARS2-211ENST00000541562 I3L4J1 428 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 ACKR2O00590 384 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 MGRN1O60291 552 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 FAM189A1O60320 539 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 KCNA4P22459 653 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 ADORA2AP29274 412 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 ELF1P32519 619 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 ATP11CQ8NB49 1132 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 HASPINQ8TF76 798 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 ZMAT2Q96NC0 199 aaKnown RBP15.65■□□□□ 0.1
VARS2-211ENST00000541562 MANSC1Q9H8J5 431 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 NUDT5Q9UKK9 219 aa15.65■□□□□ 0.1
VARS2-211ENST00000541562 LOC100653049A0A140TA62 436 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 KRT34O76011 436 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 NFASCO94856 1347 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 METTL18O95568 372 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 TRUB2O95900 331 aaKnown RBP15.64■□□□□ 0.09
VARS2-211ENST00000541562 MYL2P10916 166 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 PCK1P35558 622 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 NDUFV1P49821 464 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 MBTD1Q05BQ5 628 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 CATSPER4Q7RTX7 472 aa15.64■□□□□ 0.09
VARS2-211ENST00000541562 APOBEC3FQ8IUX4 373 aaKnown RBP15.64■□□□□ 0.09
VARS2-211ENST00000541562 CCDC124Q96CT7 223 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms