RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ZNF518BQ9C0D4 1074 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 LRMDAQ9H2I8 198 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 SCINQ9Y6U3 715 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 DNALI1O14645 258 aaPredicted RBP17.95■□□□□ 0.46
SPIDR-227ENST00000541342 KIF3CO14782 793 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 TLR3O15455 904 aaKnown RBP17.95■□□□□ 0.46
SPIDR-227ENST00000541342 RECQL4O94761 1208 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 STAU1O95793 577 aaKnown RBP17.95■□□□□ 0.46
SPIDR-227ENST00000541342 T-ENOLP0DO92 83 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 GM2AP17900 193 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 PSEN1P49768 467 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 ZNF252P-AS1Q0IIN9 211 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 NFX1Q12986 1120 aaKnown RBP17.95■□□□□ 0.46
SPIDR-227ENST00000541342 UBXN11Q5T124 520 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 SMYD5Q6GMV2 418 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 RGS9BPQ6ZS82 235 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 GSTA5Q7RTV2 222 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 TDRPQ86YL5 185 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 HHIPL1Q96JK4 782 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 CCDC77Q9BR77 488 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 CYP3A43Q9HB55 503 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 TARSP26639 723 aaKnown RBP17.95■□□□□ 0.46
SPIDR-227ENST00000541342 C4orf33Q8N1A6 199 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 FEZF2Q8TBJ5 459 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 TMEM176AQ96HP8 235 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 APOL6Q9BWW8 343 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 TJP2Q9UDY2 1190 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 NUMBLQ9Y6R0 609 aa17.95■□□□□ 0.46
SPIDR-227ENST00000541342 CCNG1P51959 295 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 CRYBB1P53674 252 aaPredicted RBP17.94■□□□□ 0.46
SPIDR-227ENST00000541342 PTPN11Q06124 597 aaPredicted RBP17.94■□□□□ 0.46
SPIDR-227ENST00000541342 SLC1A5Q15758 541 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 CYP4A22Q5TCH4 519 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.94■□□□□ 0.46
SPIDR-227ENST00000541342 ADAM33Q9BZ11 813 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 TRABDQ9H4I3 376 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 DERAQ9Y315 318 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 CALB1P05937 261 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 AXLP30530 894 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 RNASELQ05823 741 aaKnown RBP17.94■□□□□ 0.46
SPIDR-227ENST00000541342 ANKRD20A2Q5SQ80 823 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 ANKRD20A1Q5TYW2 823 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 ANKRD20A3Q5VUR7 823 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 MFSD14CQ5VZR4 134 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 KAZNQ674X7 775 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 APBB1IPQ7Z5R6 666 aaPredicted RBP17.94■□□□□ 0.46
SPIDR-227ENST00000541342 CFAP57Q96MR6 1250 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 SLITRK1Q96PX8 696 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 TRIM6Q9C030 488 aaPredicted RBP17.94■□□□□ 0.46
SPIDR-227ENST00000541342 LHX5Q9H2C1 402 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 CNTN3Q9P232 1028 aa17.94■□□□□ 0.46
SPIDR-227ENST00000541342 POC1B-GALNT4F8VUJ3 575 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 AOC2O75106 756 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 ATP2A2P16615 1042 aaKnown RBP17.93■□□□□ 0.46
SPIDR-227ENST00000541342 INCA1Q0VD86 236 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 PTPN20Q4JDL3 420 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 PPP1R15BQ5SWA1 713 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 TXNRD3NBQ6F5E7 133 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 MFSD7Q6UXD7 560 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 ALLCQ8N6M5 410 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 SLC7A6OSQ96CW6 309 aaPredicted RBP17.93■□□□□ 0.46
SPIDR-227ENST00000541342 HAO1Q9UJM8 370 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 A0A1W2PPM1 405 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 TMEM191CA6NGB0 347 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 TYROBPO43914 113 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 EDF1O60869 148 aaKnown RBP17.93■□□□□ 0.46
SPIDR-227ENST00000541342 BANF1O75531 89 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 GNAT1P11488 350 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 P4HA1P13674 534 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 PDK4Q16654 411 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 CAPN12Q6ZSI9 719 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 NME8Q8N427 588 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 FBF1Q8TES7 1133 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 WNT8BQ93098 351 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 MTG1Q9BT17 334 aaPredicted RBP17.93■□□□□ 0.46
SPIDR-227ENST00000541342 UPF3AQ9H1J1 476 aaKnown RBP17.93■□□□□ 0.46
SPIDR-227ENST00000541342 GPBP1L1Q9HC44 474 aaPredicted RBP17.93■□□□□ 0.46
SPIDR-227ENST00000541342 UBN1Q9NPG3 1134 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 WFS1O76024 890 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 ARSEP51690 589 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 NDST1P52848 882 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 SLC18A1P54219 525 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 OGDHQ02218 1023 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 CACNB2Q08289 660 aaPredicted RBP17.93■□□□□ 0.46
SPIDR-227ENST00000541342 SMC1BQ8NDV3 1235 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 C10orf82Q8WW14 230 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 MCEEQ96PE7 176 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 FOXP3Q9BZS1 431 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 TXLNGQ9NUQ3 528 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 KLK14Q9P0G3 267 aa17.93■□□□□ 0.46
SPIDR-227ENST00000541342 BARX2Q9UMQ3 279 aaPredicted RBP17.93■□□□□ 0.46
SPIDR-227ENST00000541342 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
SPIDR-227ENST00000541342 MED7O43513 233 aa17.92■□□□□ 0.46
SPIDR-227ENST00000541342 SKAP2O75563 359 aaPredicted RBP17.92■□□□□ 0.46
SPIDR-227ENST00000541342 SSR1P43307 286 aaKnown RBP17.92■□□□□ 0.46
SPIDR-227ENST00000541342 PARP6Q2NL67 630 aa17.92■□□□□ 0.46
SPIDR-227ENST00000541342 GDF6Q6KF10 455 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms