RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 AIPL1Q9NZN9 384 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 TUBGCP4Q9UGJ1 667 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 SIX4Q9UIU6 781 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 DNAJC12Q9UKB3 198 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 ADAM28Q9UKQ2 775 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 ZMYND8Q9ULU4 1186 aaPredicted RBP6.11□□□□□ -1.43
CDKN3-206ENST00000541304 MAFFQ9ULX9 164 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 CNTN6Q9UQ52 1028 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 LZTS1Q9Y250 596 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 USTQ9Y2C2 406 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 FAN1Q9Y2M0 1017 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 CEP83Q9Y592 693 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 PCDHA11Q9Y5I1 949 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 MICAL3Q7RTP6 2002 aa6.11□□□□□ -1.43
CDKN3-206ENST00000541304 CITO14578 2027 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CENPFP49454 3210 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 ALPK3Q96L96 1907 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 TMEM265A0A087WTH1 108 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 LOC100289279A0A1B0GTE1 492 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 OR6C75A6NL08 312 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 C5orf67F2Z3F1 127 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SOX1O00570 391 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 MEFVO15553 781 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CCP110O43303 1012 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 EIF4EBP3O60516 100 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CILPO75339 1184 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 LSM8O95777 96 aaKnown RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SERPING1P05155 500 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SYN1P17600 705 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SLC9A1P19634 815 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SPINK2P20155 84 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 WARSP23381 471 aaKnown RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CASP14P31944 242 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 KRT9P35527 623 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CYLC1P35663 651 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SOX5P35711 763 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 MAGEA10P43363 369 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 ASPAP45381 313 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 OR1G1P47890 313 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CLCNKBP51801 687 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 JAM2P57087 298 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SLC8A3P57103 927 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SNX16P57768 344 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 DEFB103AP81534 67 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 PLCB3Q01970 1234 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SOX4Q06945 474 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SPOUT1Q5T280 376 aaKnown RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 C10orf76Q5T2E6 689 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 PEAR1Q5VY43 1037 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 LMBRD2Q68DH5 695 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 ZNF280DQ6N043 979 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CYP26C1Q6V0L0 522 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 DSTYKQ6XUX3 929 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 TRIM72Q6ZMU5 477 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 ANKS3Q6ZW76 656 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 TMTC1Q8IUR5 882 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 FAM71AQ8IYT1 594 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CCDC170Q8IYT3 715 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 ADGRF2Q8IZF7 708 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 THEM5Q8N1Q8 247 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 MSANTD4Q8NCY6 345 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SHKBP1Q8TBC3 707 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 C2orf15Q8WU43 125 aaKnown RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SEMA4DQ92854 862 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 C18orf25Q96B23 403 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 TRIM44Q96DX7 344 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 TMEM169Q96HH4 297 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 CEP295NLQ96MC4 621 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 MMS19Q96T76 1030 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 GDF15Q99988 308 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 C11orf84Q9BUA3 381 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 NT5C1AQ9BXI3 368 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 TMPRSS13Q9BYE2 586 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 OSBPL7Q9BZF2 842 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 ZNF518BQ9C0D4 1074 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SNX25Q9H3E2 840 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 NRDE2Q9H7Z3 1164 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 ABHD10Q9NUJ1 306 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SPG21Q9NZD8 308 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 EGFL7Q9UHF1 273 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 PUF60Q9UHX1 559 aaKnown RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 BARX2Q9UMQ3 279 aaPredicted RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 SNX9Q9Y5X1 595 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 FHOD1Q9Y613 1164 aa6.1□□□□□ -1.43
CDKN3-206ENST00000541304 PDCD11Q14690 1871 aaKnown RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 KIAA0100Q14667 2235 aaKnown RBP6.1□□□□□ -1.43
CDKN3-206ENST00000541304 TTC3P53804 2025 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 CASTOR2A6NHX0 329 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 PRR19A6NJB7 356 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 LRRC53A6NM62 1247 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 MEIS3P2A8K0S8 358 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 CYB561D2O14569 222 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 GABRDO14764 452 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 NRP1O14786 923 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 ARHGAP6O43182 974 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 AP5Z1O43299 807 aa6.09□□□□□ -1.43
CDKN3-206ENST00000541304 TADA2AO75478 443 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms